Gene EcSMS35_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4042 
Symbol 
ID6145722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4132761 
End bp4133108 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content53% 
IMG OID641618867 
Producthypothetical protein 
Protein accessionYP_001746005 
Protein GI170680912 
COG category[S] Function unknown 
COG ID[COG2149] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.783904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT CCCGCCTCGG AGAAGCGCCC GATTACCGCT TCTCGCTGGC TAATGAGCGT 
ACTTTTCTGG CGTGGATCCG TACCGCACTA GGATTTCTGG CGGCGGGGGT TGGGCTTGAT
CAACTTGCGC CAGATTTCGC CACGCCCGTC ATTCGCGAAC TGCTGGCGTT GTTGTTGTGT
CTGTTTTCCG GCGGGTTAGC GATGTATGGC TACCTGCGCT GGTTACGCAA TGAAAAAGCG
ATGCGTCTGA AAGAGGACCT GCCCTACACC AACAGCTTAT TAATCATCAG CTTAATATTG
ATGGTCGTAG CGGTGATCGT TATGGGACTG GTGTTGTATG CCGGATAG
 
Protein sequence
MKISRLGEAP DYRFSLANER TFLAWIRTAL GFLAAGVGLD QLAPDFATPV IRELLALLLC 
LFSGGLAMYG YLRWLRNEKA MRLKEDLPYT NSLLIISLIL MVVAVIVMGL VLYAG