| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4039 |
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| Symbol | emrD |
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| ID | 6142808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4130723 |
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| End bp | 4131907 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641618864 |
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| Product | multidrug resistance protein D |
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| Protein accession | YP_001746002 |
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| Protein GI | 170682873 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.679822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGGC ATAGAAACGT CAATTTGTTA TTGATGTTGG TATTACTCGT GGCCGTCGGT
CAGATGGCGC AAACCATTTA TATTCCAGCT ATTGCCGATA TGGCGCGCGA TCTCAACGTC
CGTGAAGGGG CGGTGCAGAG CGTAATGGGC GCTTATCTGC TGACTTACGG TGTCTCACAG
CTGTTTTATG GCCCGATTTC CGACCGTGTG GGTCGCCGAC CGGTGATCCT CGTCGGAATG
TCCATTTTTA TGCTGGCAAC GCTGGTCGCG GTCACGACCT CCAGTTTGAC AGTATTGATT
GCCGCCAGCG CGATGCAGGG GATGGGCACC GGCGTTGGCG GCGTAATGGC GCGTACTTTG
CCGCGCGATT TATATGAACG GACACAGTTG CGCCATGCTA ATAGCCTGTT AAACATGGGA
ATTCTTGTCA GTCCGTTGCT CGCACCGCTA ATCGGCGGTC TGCTGGATAC GATGTGGAAC
TGGCGCGCCT GTTATCTCTT TTTGTTGGTA CTTTGTGCCG GTGTGACCTT CAGTATGGCC
CGCTGGATGC CGGAAACGCG TCCGGTCGAC GCACCGCGCA CGCGCCTGCT TACCAGTTAT
AAAACGCTTT TCGGTAACAG CGGTTTTAAC TGTTATTTGC TGATGCTGAT TGGCGGTCTG
GCCGGGATTG CCGCCTTTGA AGCCTGCTCC GGCGTGCTGA TGGGCGCGGT GTTAGGGCTG
AGCAGTATGA CGGTCAGTAT TTTGTTTATT CTGCCGATTC CGGCAGCGTT TTTTGGCGCA
TGGTTTGCCG GACGTCCCAA TAAACGCTTC TCCACGTTAA TGTGGCAGTC GGTTATCTGC
TGCCTGCTGG CTGGCTTGCT AATGTGGATC CCCGACTGGT TTGGCGTGAT GAATGTCTGG
ACGCTGCTCG TTCCCGCCGC GCTGTTCTTT TTCGGTGCCG GGATGCTGTT TCCGCTGGCG
ACCAGCGGCG CGATGGAGCC GTTCCCTTTC CTGGCGGGCA CGGCTGGCGC GCTGGTCGGC
GGTCTACAAA ACATTGGTTC CGGCGTGCTG GCGTCGCTCT CTGCGATGTT GCCGCAAACC
GGTCAGGGCA GCCTGGGGTT GTTGATGACC TTAATGGGAT TGTTGATCGT GCTGTGCTGG
CTACCGCTGG CGACGCGGAT GTCGCATCAG GGGCAGCCCG TTTAA
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| Protein sequence | MKRHRNVNLL LMLVLLVAVG QMAQTIYIPA IADMARDLNV REGAVQSVMG AYLLTYGVSQ
LFYGPISDRV GRRPVILVGM SIFMLATLVA VTTSSLTVLI AASAMQGMGT GVGGVMARTL
PRDLYERTQL RHANSLLNMG ILVSPLLAPL IGGLLDTMWN WRACYLFLLV LCAGVTFSMA
RWMPETRPVD APRTRLLTSY KTLFGNSGFN CYLLMLIGGL AGIAAFEACS GVLMGAVLGL
SSMTVSILFI LPIPAAFFGA WFAGRPNKRF STLMWQSVIC CLLAGLLMWI PDWFGVMNVW
TLLVPAALFF FGAGMLFPLA TSGAMEPFPF LAGTAGALVG GLQNIGSGVL ASLSAMLPQT
GQGSLGLLMT LMGLLIVLCW LPLATRMSHQ GQPV
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