| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4028 |
|---|
| Symbol | |
|---|
| ID | 6146233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4115388 |
|---|
| End bp | 4115840 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641618853 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001745991 |
|---|
| Protein GI | 170683592 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.484011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTGGA TAATGCTCGC CACGCTGGCG GTAGTGTTTG TGATTGGTTT TCGGGTGCTG
ACATCCGGGG CCAGAAAAGC GATTCGCCGT CTCAGCGATC GGCTGAATAT CGATGTCGTA
CCCGTGGAGT CGATGGTCGA TCAAATGGGA AAGTCAGCCG GTGACGAATT TTTACGTTAT
TTGCATCGCC CGGATGAGTC GCACCTGCAA AACGCCGCGC AGGTGTTGCT CATCTGGCAA
ATTGTCATTG TCGATGGTAG CGAACAGAAC CTGCTGCAAT GGCATCGGAT TTTACAAAAA
GCCCGTCTTG CCGCGCCGAT TACCGATGCT CAGGTCAGGC TGGCGCTGGG TTTTCTGCGC
GAAACCGAAC CTGAAATGCA GGATATTAAT GCTTTTCAGA TGCGCTATAA CGCGTTCTTT
CAGCCTGCCG AAGGCGTTCA CTGGCTGCAT TAA
|
|---|
| Protein sequence | MIWIMLATLA VVFVIGFRVL TSGARKAIRR LSDRLNIDVV PVESMVDQMG KSAGDEFLRY
LHRPDESHLQ NAAQVLLIWQ IVIVDGSEQN LLQWHRILQK ARLAAPITDA QVRLALGFLR
ETEPEMQDIN AFQMRYNAFF QPAEGVHWLH
|
|---|
| |