| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4023 |
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| Symbol | |
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| ID | 6147192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4102441 |
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| End bp | 4104138 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641618848 |
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| Product | invasion protein regulator |
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| Protein accession | YP_001745986 |
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| Protein GI | 170680759 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.876946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGC AACATGGAAA AAATAATACA CAACAATATA TATTTGGCGA CTTTGTATTA
AAAAACAATG GAATATTATT ATTCAAAAAC AAAGAATATC ATATTCCCCC GAAAGAACTT
GGCGTTATCA TTCTATTACT TAATGCTGAC GGTGAAATTG TTAGCAAAGA AGAGATTATC
GATAAGGTCT GGAGCGCAAG TGTTGCCAGT GATGAATCTC TAACACGATG TATTTATGCA
TTGCGCAAAC TTTTGCATGA GAATAAACAG TGTAAGTATA TCGAAACGGT CTATGGTCGT
GGATACCGTT TTACTGTACC TATTGTGATT GTGACCGATA ATGAACCGGT AAAGTCGACC
ACCACTCTTG CCGTTTTTCC CTTTCGTACT GAAGGTTCGA TCAATGTTCT AAAACTCCAT
TACGAACTTG TCCAGGGCCT TTCAAAATAT GCTTTTTGTG GTTTAGATAT TTTACCCGCT
TCGGTAACAA ATGAGGCCAG TGATTTCTCC ACCATCCATC AGTTTATCAA TAAAACAGGT
CCAGAATATT ATATTATGGG TCAGGTCGTT CACTATGGTA AAAACTGGCG TTTATTTATT
GAGTTAATCC ATGCCAGAAC GCATAAATTG ATTGATCATC AAAGTATTGA TTTCAACCCC
GATAATCCTC TTTCCGTATT ATTATCACAA GTAATTAATA TTCTTATTGA AAAAATACCC
AACATTAATT TTAAATCTAT TAATACACAA CAAATGCCAT CTCTGGATTC TGCTGTTATG
TATATGAATG GCAGGATGGA AATGTACCGT TATACACCAG AAAGTTTGAA ACGAGCATTA
GTAATATTTA GAGATTGTGT GAGTACGCAA CCGCAAAATA CCTTGCCCTA CTGTTGCCTG
GCGGAATGCC ATATATCATT AGCACTCCTT GGAATCAGTG AACAAAAACA AGCAATAACT
ACGGCAGTAA CCTCCATTGA AAAGGCTCTG GAAATTAACC CTTCAAATTC TCAGGCATTG
GGTTTACTGG GTTTAATCAG TGGGCTAAAA GATGAACATT CAGTGTCTAA TGTGCTATTT
AAGCAAGCAC ATTTACTCAA ACCTAATTCG CCAGACGTTT ATTATTATCA GTCGCTGCTA
TATTTTTTGA ACGGCGACCT TGCAAGAGCA TTTAATTTAA TAGAAAAAAG CATTGCTCTT
GAACCCAATA AAATGGGCAT AAGCATTCTT AAATTAATTA TACTTTATTA CACATCCCCC
CTCGATAACG CGATATCTTT TGCATTAAAT CTTAACAGTC AAAACACCTG TAATAATCCA
ATTATTACCT CTATTCTGGC TATGTTCATG GCACTGAAAG GACATAATGA CAAAGCCAAA
AGTTTATTGC TTAAACTTGA GCCTGAACAT GGTCTTGATT ACACCTGCGT TAACTCGCTT
TATACGAAGT TTCTGATCTA TGGCGCATCT ATAAAAAATG ACATTATGAA GTTACTGGCA
AATATTAACA CTAACAAAAT CAATGGTGTG ATTTTGCCGT TAATTTACAC TGTTTATGGT
AAGAAAGAAT ATGAAAAGCG CTGGCAACAA TTAATTAAAG AGAATGATTT ATGGTCAAAT
GTTTTGCTTC ATGACCCCCG TTTGCTCAGT GTAAAAAATG AATTTAATAC TATTGGTGTG
ATGCGTACTT CTGCGTAA
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| Protein sequence | MQLQHGKNNT QQYIFGDFVL KNNGILLFKN KEYHIPPKEL GVIILLLNAD GEIVSKEEII
DKVWSASVAS DESLTRCIYA LRKLLHENKQ CKYIETVYGR GYRFTVPIVI VTDNEPVKST
TTLAVFPFRT EGSINVLKLH YELVQGLSKY AFCGLDILPA SVTNEASDFS TIHQFINKTG
PEYYIMGQVV HYGKNWRLFI ELIHARTHKL IDHQSIDFNP DNPLSVLLSQ VINILIEKIP
NINFKSINTQ QMPSLDSAVM YMNGRMEMYR YTPESLKRAL VIFRDCVSTQ PQNTLPYCCL
AECHISLALL GISEQKQAIT TAVTSIEKAL EINPSNSQAL GLLGLISGLK DEHSVSNVLF
KQAHLLKPNS PDVYYYQSLL YFLNGDLARA FNLIEKSIAL EPNKMGISIL KLIILYYTSP
LDNAISFALN LNSQNTCNNP IITSILAMFM ALKGHNDKAK SLLLKLEPEH GLDYTCVNSL
YTKFLIYGAS IKNDIMKLLA NINTNKINGV ILPLIYTVYG KKEYEKRWQQ LIKENDLWSN
VLLHDPRLLS VKNEFNTIGV MRTSA
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