| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4014 |
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| Symbol | setC |
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| ID | 6142948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4093311 |
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| End bp | 4094495 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641618839 |
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| Product | sugar efflux transporter C |
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| Protein accession | YP_001745977 |
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| Protein GI | 170683995 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00899] sugar efflux transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAA CGGCTACTAC TCCATCAAAA ATACTTGATC TCACTGCCGC GGCATTTTTA
CTTGTCGCCT TTCTGACGGG TATTGCGGGC GCTCTCCAGA CTCCCACCCT AAGTATATTC
CTCGCAGATG AACTGAAAGC CCGTCCTATA ATGGTAGGTT TTTTCTTCAC CGGTAGCGCT
ATTATGGGGA TTCTGGTCAG TCAATTTCTG GCAAGGCACT CCGATAAACA AGGCGACCGT
AAATTACTGA TCCTGCTATG TTGCTTATTT GGAGTGTTGG CCTGCACGCT TTTTGCGTGG
AATCGCAACT ACTTCATTCT CCTCTCTACG GGCGTACTTC TGAGTAGTTT TGCTTCCACT
GCAAACCCGC AAATGTTCGC CCTCGCCCGT GAACACGCCG ACAGAACAGG CCGTGAGACG
GTCATGTTCA GTACATTTTT ACGTGCTCAG ATCTCGCTTG CCTGGGTTAT CGGGCCACCG
CTCGCTTATG AACTGGCAAT GGGATTTAGT TTTAAAGTGA TGTATCTCAC CGCTGCCATC
GCATTTGTTG TTTGCGGACT GATAGTCTGG TTGTTTTTGC CATCAATACA AAGAAATATT
CCTGTCGTTA CCCAACCCGT AGAAATTTTA CCCTCCATCC ATAGAAAGCG GGATACACGG
CTACTTTTTG TAGTCTGTTC AATGATGTGG GCGGCGAATA ATCTCTACAT GATAAATATG
CCGCTATTTA TTATTGATGA ACTGCATCTA ACCGATAAAC TGGCTGGAGA AATGATTGGT
ATCGCTGCCG GTCTGGAAAT TCCGATGATG TTAATCGCAG GCTATTACAT GAAACGTATT
GGCAAGCGGC TATTAATGCT CATTGCTATC GTGAGTGGTA TGTGTTTTTA CGCCAGCGTA
CTCATGGCGA CGACTCCGGC AATTGAGCTG GAATTGCAAA TTCTAAATGC CATTTTCCTT
GGTATTCTCT GTGGTATCGG CATGCTTTAT TTTCAGGATC TGATGCCTGA AAAAATAGGC
TCTGCGACAA CGTTATATGC AAATACCTCA CGCGTCGGCT GGATTATCGC CGGCTCTGTT
GACGGAATTA TGGTTGAAAT CTGGAGCTAC CACGCGTTGT TCTGGCTGGC GATAGGGATG
TTGGGTATTG CGATGATTTG CCTGCTGTTT ATTAAAGATA TTTAG
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| Protein sequence | MQKTATTPSK ILDLTAAAFL LVAFLTGIAG ALQTPTLSIF LADELKARPI MVGFFFTGSA
IMGILVSQFL ARHSDKQGDR KLLILLCCLF GVLACTLFAW NRNYFILLST GVLLSSFAST
ANPQMFALAR EHADRTGRET VMFSTFLRAQ ISLAWVIGPP LAYELAMGFS FKVMYLTAAI
AFVVCGLIVW LFLPSIQRNI PVVTQPVEIL PSIHRKRDTR LLFVVCSMMW AANNLYMINM
PLFIIDELHL TDKLAGEMIG IAAGLEIPMM LIAGYYMKRI GKRLLMLIAI VSGMCFYASV
LMATTPAIEL ELQILNAIFL GILCGIGMLY FQDLMPEKIG SATTLYANTS RVGWIIAGSV
DGIMVEIWSY HALFWLAIGM LGIAMICLLF IKDI
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