| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4000 |
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| Symbol | |
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| ID | 6144966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4079665 |
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| End bp | 4081047 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641618825 |
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| Product | putative transporter |
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| Protein accession | YP_001745964 |
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| Protein GI | 170681221 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.947516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGTG AAGTGTTGTC CGTTAAAGAG AAAATTGGTT ATGGCATGGG AGACGCCGCC
AGCCACATTA TTTTCGATAA CGTAATGTTA TATATGATGT TCTTTTATAC CGATATTTTT
GGCATTCCTG CCGGATTTGT CGGAACCATG TTTTTGGTCG CTCGTGCACT GGATGCGATT
TCCGATCCTT GCATGGGGTT GTTGGCCGAT CGAACGCGCT CTCGCTGGGG TAAATTTCGT
CCGTGGGTAC TGTTTGGCGC ACTGCCATTT GGGATCGTCT GTGTACTGGC CTATAGCACG
CCAGATCTCA GTATGAACGG AAAAATGATT TATGCAGCAA TTACTTACAC CCTACTTACC
TTACTTTATA CCATCGTTAA TATCCCTTAC TGCGCATTGG GTGGTGTAAT CACCAATGAC
CCGACTCAGC GTATCTCGCT GCAATCCTGG CGTTTTGTGC TGGCGACTGC GGGAGGCATG
CTCTCTACTG TTCTGATGAT GCCGCTGGTT AATTTAATTG GTGGTGATAA TAAACCACTC
GGTTTCCAGG GCGGTATCGC GGTCCTTTCC GTGGTGGCAT TCATGATGCT GGCATTTTGT
TTCTTCACCA CTAAAGAACG CGTTGAAGCA CCACCTACAA CGACGTCTAT GAGGGAAGAT
TTACGTGATA TCTGGCAAAA CGACCAGTGG CGTATTGTCG GTTTACTAAC CATTTTCAAT
ATTCTGGCGG TATGCGTACG CGGCGGGGCG ATGATGTATT ACGTCACATG GATTTTGGGT
ACGCCGGAAG TGTTTGTCGC TTTTCTTACC ACTTATTGCG TGGGTAACCT GATTGGTTCC
GCACTGGCGA AACCGCTGAC CGACTGGAAA TGTAAAGTCA CTATCTTCTG GTGGACGAAC
GCCCTGCTGG CAGTGATTAG CCTCGCGATG TTCTTTGTTC CTATGCAGGC CAGCATCACC
ATGTTTGTCT TCATCTTCGT GATTGGTGTG TTGCATCAAC TGGTGACACC TATCCAGTGG
GTAATGATGT CCGATACCGT CGACTACGGC GAGTGGTGTA ATGGTAAACG CCTGACCGGG
ATCAGTTTTG CTGGCACGCT GTTTGTGCTC AAACTGGGGT TGGCCTTCGG CGGCGCTCTT
ATCGGCTGGA TGCTGGCTTA TGGCGGATAT GATGCGGCAG AAAAAGCGCA GAACAGCGCC
ACGATTAGCA TCATTATCGC GCTATTCACG ATTGTTCCGG CGATCTGTTA TTTGCTGAGC
GCGATTATCG CTAAACGCTA CTACTCACTC ACGACGCACA ATCTGAAAAC CGTTATGGAA
CAGCTGGCCC AGGGCAAACG CCGTTGCCAG CAACAATTCA CCTCTCAAGA AGTGCAGAAC
TAA
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| Protein sequence | MKSEVLSVKE KIGYGMGDAA SHIIFDNVML YMMFFYTDIF GIPAGFVGTM FLVARALDAI
SDPCMGLLAD RTRSRWGKFR PWVLFGALPF GIVCVLAYST PDLSMNGKMI YAAITYTLLT
LLYTIVNIPY CALGGVITND PTQRISLQSW RFVLATAGGM LSTVLMMPLV NLIGGDNKPL
GFQGGIAVLS VVAFMMLAFC FFTTKERVEA PPTTTSMRED LRDIWQNDQW RIVGLLTIFN
ILAVCVRGGA MMYYVTWILG TPEVFVAFLT TYCVGNLIGS ALAKPLTDWK CKVTIFWWTN
ALLAVISLAM FFVPMQASIT MFVFIFVIGV LHQLVTPIQW VMMSDTVDYG EWCNGKRLTG
ISFAGTLFVL KLGLAFGGAL IGWMLAYGGY DAAEKAQNSA TISIIIALFT IVPAICYLLS
AIIAKRYYSL TTHNLKTVME QLAQGKRRCQ QQFTSQEVQN
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