Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3991 |
Symbol | |
ID | 6143269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4070099 |
End bp | 4070779 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641618817 |
Product | hypothetical protein |
Protein accession | YP_001745956 |
Protein GI | 170680492 |
COG category | [R] General function prediction only |
COG ID | [COG3822] ABC-type sugar transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTT CACAAATTAA TTATGTTATT GATAAAGCAC ATGCCATTGC GCAGACCTTC CGCGTTTGTT TGCCAGAGTT CGCCTATTTT ACGGTGGATG ACTGGCTGCA GCTGGAACGG GATAACTGGC AAGAAGTGGT CGACTTACAG CTCGGTTGGG ATATCACCGA TTTTGGTCGT GGTGATTTCA ACCAAACGGG ACTAACACTG CTAACGATGC GCAACGGCGC GCTGGGGGCG GCGGCATATC CAAAACCGTA TGCTGAGAAA ATGTTGCAGA TCCAACAAGA TCAGCAAACT CCCTGGCATT TTCACACCCA CAAAATGGAA GATATCCTCA ATCGGGGCGG TGGAGACTTA TGCATGCAGT TGGCCTGGGC CAACGAAGCC AATCTCTGTG ATGATCAACG AGTCATTACC GTGAGTGTTG ATGGTCAGCG GCGTACCATG AAACCTGGTG AAACGCTGGT GCTAAAGCCG GGGCAGGGCA TTTGCCTGCC GCCGCGTCTG TATCATCGCT TCTGGGCGGA AAAAGCGTTT GTTCTCGGCT GGGAAATCTC GATGGTAAAT GATGACCAAC ACGATAACTA TTTTCTTGAG CCGGGAGGAC GTTTTCCGGC GATAGAAGAA GATGAACCGG TGAAATGGTT ATTGTGCAGT GAGTATGGAA TTTTGCGCTA A
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Protein sequence | MKRSQINYVI DKAHAIAQTF RVCLPEFAYF TVDDWLQLER DNWQEVVDLQ LGWDITDFGR GDFNQTGLTL LTMRNGALGA AAYPKPYAEK MLQIQQDQQT PWHFHTHKME DILNRGGGDL CMQLAWANEA NLCDDQRVIT VSVDGQRRTM KPGETLVLKP GQGICLPPRL YHRFWAEKAF VLGWEISMVN DDQHDNYFLE PGGRFPAIEE DEPVKWLLCS EYGILR
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