Gene EcSMS35_3991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3991 
Symbol 
ID6143269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4070099 
End bp4070779 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content50% 
IMG OID641618817 
Producthypothetical protein 
Protein accessionYP_001745956 
Protein GI170680492 
COG category[R] General function prediction only 
COG ID[COG3822] ABC-type sugar transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT CACAAATTAA TTATGTTATT GATAAAGCAC ATGCCATTGC GCAGACCTTC 
CGCGTTTGTT TGCCAGAGTT CGCCTATTTT ACGGTGGATG ACTGGCTGCA GCTGGAACGG
GATAACTGGC AAGAAGTGGT CGACTTACAG CTCGGTTGGG ATATCACCGA TTTTGGTCGT
GGTGATTTCA ACCAAACGGG ACTAACACTG CTAACGATGC GCAACGGCGC GCTGGGGGCG
GCGGCATATC CAAAACCGTA TGCTGAGAAA ATGTTGCAGA TCCAACAAGA TCAGCAAACT
CCCTGGCATT TTCACACCCA CAAAATGGAA GATATCCTCA ATCGGGGCGG TGGAGACTTA
TGCATGCAGT TGGCCTGGGC CAACGAAGCC AATCTCTGTG ATGATCAACG AGTCATTACC
GTGAGTGTTG ATGGTCAGCG GCGTACCATG AAACCTGGTG AAACGCTGGT GCTAAAGCCG
GGGCAGGGCA TTTGCCTGCC GCCGCGTCTG TATCATCGCT TCTGGGCGGA AAAAGCGTTT
GTTCTCGGCT GGGAAATCTC GATGGTAAAT GATGACCAAC ACGATAACTA TTTTCTTGAG
CCGGGAGGAC GTTTTCCGGC GATAGAAGAA GATGAACCGG TGAAATGGTT ATTGTGCAGT
GAGTATGGAA TTTTGCGCTA A
 
Protein sequence
MKRSQINYVI DKAHAIAQTF RVCLPEFAYF TVDDWLQLER DNWQEVVDLQ LGWDITDFGR 
GDFNQTGLTL LTMRNGALGA AAYPKPYAEK MLQIQQDQQT PWHFHTHKME DILNRGGGDL
CMQLAWANEA NLCDDQRVIT VSVDGQRRTM KPGETLVLKP GQGICLPPRL YHRFWAEKAF
VLGWEISMVN DDQHDNYFLE PGGRFPAIEE DEPVKWLLCS EYGILR