| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3989 |
|---|
| Symbol | yicE |
|---|
| ID | 6146722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4066834 |
|---|
| End bp | 4068225 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641618815 |
|---|
| Product | xanthine permease |
|---|
| Protein accession | YP_001745954 |
|---|
| Protein GI | 170682109 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTT CCACCCTCGA GTCAGAAAAT GCGCAACCGG TTGCGCAGAC TCAAAACAGC
GAACTGATTT ACCGTCTTGA AGATCGTCCG CCGCTTCCTC AAACCCTGTT TGCCGCATGT
CAGCATTTGC TGGCGATGTT CGTTGCGGTG ATCACGCCAG CGCTATTAAT CTGCCAGGCG
CTGGGTTTAC CGGCACAAGA CACGCAACAC ATTATTAGTA TGTCGCTGTT TGCCTCCGGT
GTGGCATCGA TTATTCAAAT TAAGGCCTGG GGTCCGGTTG GCTCCGGGTT GTTGTCTATT
CAGGGCACCA GCTTCAACTT TGTTGCTCCG CTGATTATGG GCGGCACAGC GCTGAAGACC
GGTGGTGCTG ATGTTCCTAC CATGATGGCG GCTTTGTTCG GCACGTTGAT GCTGGCAAGT
TGTACCGAGA TGGTGATCTC CCGCGTTCTG CATCTGGCGC GCCGCATTAT TACGCCGCTG
GTTTCTGGCG TTGTGGTGAT GATTATCGGC CTGTCGCTAA TTCAGGTGGG GCTGACCTCC
ATTGGCGGCG GTTACGCAGC CATGAGCGAT AACACCTTCG GCGCACCGAA AAATCTGCTG
CTGGCAGGCG TGGTCTTAGC CTTAATTATC CTGCTTAACC GTCAACGTAA CCCTTACTTA
CGCGTGGCCT CACTGGTGAT TGCGATGGCG GCCGGATATG CGCTGGCGTG GTTTATGGAC
ATGTTGCCAG AAAGCAACGA ACCGATGACG CAAGAACTGA TTATGGTGCC AACGCCGCTC
TATTACGGTC TTGGCATTGA ATGGAGTCTG CTGCTGCCGC TGATGCTGGT CTTTATGATC
ACTTCGCTGG AAACCATTGG CGATATCACG GCGACCTCTG ACGTTTCCGA ACAGCCGGTT
TCCGGTCCGC TGTACATGAA ACGCCTGAAA GGCGGCGTGC TGGCAAACGG CCTGAACTCG
TTTGTCTCGG CGGTATTTAA TACCTTCCCG AACTCCTGCT TCGGGCAGAA CAACGGGGTG
ATCCAGTTAA CCGGTGTTGC CAGCCGCTAT GTCGGTTTTG TCGTCGCGCT GATGTTGATC
GTGCTGGGTC TGTTCCCGGC AGTGAGCGGT TTTGTGCAAC ACATTCCAGA ACCGGTTCTG
GGCGGCGCAA CGCTTGTAAT GTTTGGCACC ATCGCTGCCT CCGGTGTGCG CATTGTGTCT
CGTGAGCCGC TGAACCGTCG GGCGATTCTG ATTATCGCGC TGTCGCTGGC GGTTGGTCTG
GGCGTGTCTC AGCAGCCGCT GATTTTGCAG TTTGCCCCTG AATGGCTGAA AAACCTGCTC
TCCTCCGGGA TCGCCGCGGG CGGTATTACT GCCATCGTGC TGAATCTGAT TTTCCCACCA
GAAAAACAGT AA
|
|---|
| Protein sequence | MSVSTLESEN AQPVAQTQNS ELIYRLEDRP PLPQTLFAAC QHLLAMFVAV ITPALLICQA
LGLPAQDTQH IISMSLFASG VASIIQIKAW GPVGSGLLSI QGTSFNFVAP LIMGGTALKT
GGADVPTMMA ALFGTLMLAS CTEMVISRVL HLARRIITPL VSGVVVMIIG LSLIQVGLTS
IGGGYAAMSD NTFGAPKNLL LAGVVLALII LLNRQRNPYL RVASLVIAMA AGYALAWFMD
MLPESNEPMT QELIMVPTPL YYGLGIEWSL LLPLMLVFMI TSLETIGDIT ATSDVSEQPV
SGPLYMKRLK GGVLANGLNS FVSAVFNTFP NSCFGQNNGV IQLTGVASRY VGFVVALMLI
VLGLFPAVSG FVQHIPEPVL GGATLVMFGT IAASGVRIVS REPLNRRAIL IIALSLAVGL
GVSQQPLILQ FAPEWLKNLL SSGIAAGGIT AIVLNLIFPP EKQ
|
|---|
| |