| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3985 |
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| Symbol | spoT |
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| ID | 6145904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4060424 |
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| End bp | 4062532 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618811 |
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| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
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| Protein accession | YP_001745950 |
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| Protein GI | 170679973 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTATCTGT TTGAAAGCCT GAATCAACTG ATTCAAACCT ACCTGCCGGA AGACCAAATC
AAGCGTCTGC GGCAGGCGTA TCTCGTTGCA CGTGATGCTC ACGAGGGGCA AACACGTTCA
AGCGGTGAAC CCTATATCAC GCACCCGGTG GCGGTTGCCT GCATTCTGGC CGAGATGAAA
CTCGACTATG AAACGCTGAT GGCGGCGCTG CTGCATGACG TGATTGAAGA TACTCCCGCC
ACCTACCAGG ACATGGAACA GCTTTTTGGT AAAAGCGTCG CCGAGCTGGT AGAGGGGGTG
TCGAAACTTG ATAAGCTCAA GTTCCGCGAT AAGAAAGAGG CGCAGGCCGA AAACTTTCGC
AAGATGATTA TGGCGATGGT GCAGGATATC CGCGTCATTC TCATCAAACT TGCCGACCGT
ACCCACAACA TGCGCACGCT GGGCTCACTT CGCCCGGACA AACGTCGCCG CATCGCCCGT
GAAACACTCG AAATTTACAG CCCGCTGGCG CACCGTTTAG GTATCCACCA CATTAAAACC
GAACTCGAAG AGCTGGGTTT TGAGGCGCTG TATCCCAACC GTTACCGCGT AATCAAAGAA
GTGGTGAAAG CCGCACGCGG CAACCGTAAA GAGATGATCC AAAAAATCCT CTCTGAAATC
GAAGGGCGTT TGCAGGAAGC GGGAATACCG TGCCGCGTCA GTGGTCGCGA GAAGCATCTT
TATTCGATCT ACTGCAAAAT GGTGCTCAAA GAGCAGCGTT TTCACTCAAT CATGGACATC
TACGCTTTCC GCGTGATCGT CAATGATTCC GACACCTGTT ATCGCGTGCT CGGGCAAATG
CATAGCCTGT ACAAGCCGCG TCCGGGTCGC GTGAAAGACT ACATCGCCAT TCCAAAAGCG
AACGGCTATC AGTCTTTGCA CACCTCGATG ATTGGCCCGC ACGGCGTGCC GGTTGAGGTC
CAAATCCGTA CCGAAGATAT GGATCAGATG GCGGAGATGG GTGTTGCCGC GCACTGGGCT
TATAAAGAGC ACGGCGAAAC CAGCACCACC GCGCAAATCC GCGCCCAGCG CTGGATGCAA
AGCCTGCTGG AGCTGCAACA GAGTGCCGGT AGCTCGTTTG AATTTATCGA GAGCGTTAAA
TCCGATCTCT TCCCGGATGA GATTTACGTT TTCACACCGG AAGGGCGCAT TGTCGAACTG
CCTGCCGGTG CAACGCCCGT CGACTTCGCT TATGCGGTGC ATACCGATAT CGGTCATGCC
TGCGTGGGCG CGCGTGTCGA CCGTCAGCCT TACCCGCTGT CGCAGCCGCT TACCAGCGGT
CAAACCGTTG AAATCATTAC CGCACCGGGC GCTCGCCCGA ATGCCGCGTG GCTGAACTTT
GTCGTCAGCT CGAAAGCGCG CGCCAAAATT CGTCAGTTGC TGAAAAACCT CAAGCGTGAT
GATTCTGTAA GCCTGGGACG TCGTCTGCTC AACCATGCGT TGGGTGGTAG CCGTAAGCTC
AATGAAATCC CGCAGGAAAA TATTCAGCGC GAGCTGGACC GCATGAAGCT GGCAACGCTT
GACGATCTGC TGGCTGAAAT CGGCCTTGGT AACGCAATGA GCGTGGTGGT CGCGAAAAAT
CTGCAACATG GGGACGCCTC CATTCCACCG GCAACCCAAA GTCACGGACA TCTGCCCATT
AAAGGTGCCG ATGGCGTGCT GATCACCTTT GCGAAATGCT GCCGCCCTAT TCCTGGCGAC
CCGATTATCG CCCACGTGAG CCCCGGTAAA GGTCTGGTGA TCCACCATGA ATCCTGCCGT
AACATCCGTG GCTACCAGAA AGAGCCAGAG AAGTTTATGG CTGTGGAATG GGATAAAGAG
ACGGCGCAGG AGTTCATCAC CGAAATCAAG GTGGAGATGT TCAATCATCA GGGCGCGCTG
GCAAACCTGA CAGCGGCAAT TAACACCACG ACCTCGAATA TTCAAAGTTT GAATACGGAA
GAGAAAGATG GTCGCGTCTA CAGCGCCTTT ATTCGTCTGA CCGCCCGTGA CCGTGTGCAT
CTGGCGAATA TCATGCGCAA AATCCGCGTG ATGCCAGACG TGATTAAAGT CACCCGAAAC
CGAAATTAA
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| Protein sequence | MYLFESLNQL IQTYLPEDQI KRLRQAYLVA RDAHEGQTRS SGEPYITHPV AVACILAEMK
LDYETLMAAL LHDVIEDTPA TYQDMEQLFG KSVAELVEGV SKLDKLKFRD KKEAQAENFR
KMIMAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAR ETLEIYSPLA HRLGIHHIKT
ELEELGFEAL YPNRYRVIKE VVKAARGNRK EMIQKILSEI EGRLQEAGIP CRVSGREKHL
YSIYCKMVLK EQRFHSIMDI YAFRVIVNDS DTCYRVLGQM HSLYKPRPGR VKDYIAIPKA
NGYQSLHTSM IGPHGVPVEV QIRTEDMDQM AEMGVAAHWA YKEHGETSTT AQIRAQRWMQ
SLLELQQSAG SSFEFIESVK SDLFPDEIYV FTPEGRIVEL PAGATPVDFA YAVHTDIGHA
CVGARVDRQP YPLSQPLTSG QTVEIITAPG ARPNAAWLNF VVSSKARAKI RQLLKNLKRD
DSVSLGRRLL NHALGGSRKL NEIPQENIQR ELDRMKLATL DDLLAEIGLG NAMSVVVAKN
LQHGDASIPP ATQSHGHLPI KGADGVLITF AKCCRPIPGD PIIAHVSPGK GLVIHHESCR
NIRGYQKEPE KFMAVEWDKE TAQEFITEIK VEMFNHQGAL ANLTAAINTT TSNIQSLNTE
EKDGRVYSAF IRLTARDRVH LANIMRKIRV MPDVIKVTRN RN
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