| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3978 |
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| Symbol | rph |
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| ID | 6144068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4053855 |
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| End bp | 4054571 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641618804 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001745943 |
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| Protein GI | 170680501 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.055913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCAG CAGGCCGTAG CAATAATCAG GTGCGTCCCG TTACCCTGAC TCGTAACTAT
ACAAAACATG CAGAAGGCTC GGTGCTGGTC GAATTTGGCG ATACCAAAGT ATTGTGTACC
GCCTCTATTG AAGAAGGCGT GCCGCGCTTC CTGAAAGGTC AGGGCCAGGG CTGGATCACC
GCAGAGTACG GCATGCTGCC ACGTTCTACC CACACCCGTA ACGCGCGTGA AGCAGCGAAA
GGTAAGCAGG GTGGGCGCAC AATGGAAATC CAGCGTCTGA TCGCCCGTGC TCTTCGCGCA
GCAGTAGATT TGAAAGCGCT GGGTGAGTTC ACTATTACGC TGGACTGCGA CGTGCTTCAG
GCTGATGGTG GCACGCGTAC CGCTTCGATT ACGGGTGCCT GCGTGGCGCT GGCAGATGCG
TTACAGAAGC TGGTGGAAAA CGGCAAGCTG AAAACCAACC CGATGAAAGG GATGGTAGCC
GCGGTTTCTG TCGGGATTGT GAACGGCGAA GCGGTTTGCG ATCTGGAATA CGTTGAAGAC
TCTGCCGCAG AGACCGACAT GAACGTAGTG ATGACCGAAG ACGGGCGCAT CATTGAAGTG
CAGGGGACGG CAGAAGGCGA GCCGTTCACC CATGAAGAGC TGCTCACCTT GTTGGCGCTG
GCCCGAGGGG GAATCGAATC CATTGTAGCG ACGCAGAAGG CGGCGCTGGC AAACTGA
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| Protein sequence | MRPAGRSNNQ VRPVTLTRNY TKHAEGSVLV EFGDTKVLCT ASIEEGVPRF LKGQGQGWIT
AEYGMLPRST HTRNAREAAK GKQGGRTMEI QRLIARALRA AVDLKALGEF TITLDCDVLQ
ADGGTRTASI TGACVALADA LQKLVENGKL KTNPMKGMVA AVSVGIVNGE AVCDLEYVED
SAAETDMNVV MTEDGRIIEV QGTAEGEPFT HEELLTLLAL ARGGIESIVA TQKAALAN
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