| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3973 |
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| Symbol | radC |
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| ID | 6144789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4049912 |
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| End bp | 4050580 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641618799 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_001745938 |
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| Protein GI | 170682096 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000015619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAAACA ATGCACAGCT GTTGATGCCG CGCGAAAAAA TGCTGAAGTT TGGTATTAGC
GCCTTAACGG ATGTCGAGCT GCTGGCGCTA TTTCTGCGTA CCGGAACGCG CGGTAAAGAT
GTATTAACCC TGGCAAAAGA GATGCTGGAG AATTTCGGCT CTCTTTATGG CTTGTTAACC
TCTGAATATG AACAGTTTAG TGGCGTTCAT GGAATTGGCG TGGCGAAATT CGCCCAGTTA
AAGGGGATTG CCGAACTGGC GCGGCGTTAC TACAACGTGC GGATGCGTGA AGAAAGCCCT
TTACTCAGCC CGGAGATGAC GCGGGAATTT TTACAAAGCC AGCTTACGGG CGAGGAGCGG
GAGATCTTTA TGGTGATCTT TCTCGACTCA CAACACCGGG TTATAACGCA TAGCCGTCTT
TTTTCCGGCA CGCTAAACCA TGTTGAAGTC CATCCTCGGG AAATTATCCG CGAAGCGATA
AAAATAAATG CCTCGGCGCT GATCCTTGCA CATAATCACC CTTCGGGTTG TGCTGAACCC
AGTAAAGCGG ATAAACTCAT TACTGAACGG ATAATAAAGA GTTGTCAGTT CATGGATTTA
CGCGTGCTCG ACCATATCGT GATTGGGCGT GGAGAGTATG TTTCTTTTGC CGAACGCGGC
TGGATTTAA
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| Protein sequence | MKNNAQLLMP REKMLKFGIS ALTDVELLAL FLRTGTRGKD VLTLAKEMLE NFGSLYGLLT
SEYEQFSGVH GIGVAKFAQL KGIAELARRY YNVRMREESP LLSPEMTREF LQSQLTGEER
EIFMVIFLDS QHRVITHSRL FSGTLNHVEV HPREIIREAI KINASALILA HNHPSGCAEP
SKADKLITER IIKSCQFMDL RVLDHIVIGR GEYVSFAERG WI
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