| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3966 |
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| Symbol | rfaG |
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| ID | 6145985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4043969 |
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| End bp | 4045093 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641618792 |
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| Product | lipopolysaccharide core biosynthesis protein RfaG |
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| Protein accession | YP_001745931 |
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| Protein GI | 170682059 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0237842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGTTG CTTTTTGTTT ATATAAATAT TTTCCCTTTG GCGGTTTGCA GCGCGATTTT
ATGCGTATTG CTCAGACAGT TGCCGCCCGA GGTCATCATG TTCGGGTTTA TACCCAGTCG
TGGGAAGGCG AATGCCCTGA TGTATTTGAA CTGATCAAAG TGCCGGTTAA TTCGCATACC
AATCACGGGC GCAATGCGGA ATATTTTGCC TGGGTGCAAA AACATTTACG TGAACACCCC
GTCGATAGAG TCGTTGGATT TAATAAAATG CCGGGGCTGG ACGTTTATTA TGCCGCTGAT
GTTTGTTATG CCGAGAAAGT AGCGCAGGAG AAAGGCTTTT TCTATCGCCT GACGTCACGT
TATCGCCATT ATGCCGCCTT TGAGCGGGCA ACCTTCGAAC AGGGCAAGCC GACACAGCTG
CTGATGCTGA CAGATAAGCA AATCGCCGAT TTCCAGAAAC ATTATCAGAC TGAAGCGGAA
CGTTTTCATA TTCTGCCACC GGGGATTTAT CCTGATCGTA AATATAGCCA GCAACCAGCG
AATAGCCGTG AAATCTTCCG TAAGAAGAAT GGAATAACCG AACAACAATA TTTATTGTTG
CAGGTCGGTT CAGACTTCAC GCGTAAAGGT GTCGATCGTT CCATTGAAGC ACTTGCTTCG
TTACCGGATT CGCTGCGCCA CAACACATTA CTATATGTTG TTGGGCAGGA TAAACCGCGA
AAATTTGAGG CGCTGGCAGA AAAACGCGGC GTGCGCAGTA ATGTTCACTT CTTCTCGGGG
CGCAACGATG TCTCGGAATT AATGGCGGCG GCGGATTTAT TACTTCATCC TGCCTACCAG
GAAGCGGCGG GAATTGTGTT GCTGGAAGCG ATAACTGCAG GATTACCGGT ACTAACAACA
GCCGTTTGTG GCTATGCGCA TTATATTGTC GACGCCAATT GCGGCGAGGC TATTGCTGAG
CCATTCCGCC AGGAAACATT GAATGAGATT TTACGCAAAG CGTTAACGCA ATCTTCATTG
CGCCAGGCCT GGGCGGAAAA TGCGCGACAT TATGCTGATA CACAAGATTT ATACAGTCTG
CCAGAGAAAG CGGCGGACAT CATAACGGGT GGTCTGGATG GTTGA
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| Protein sequence | MIVAFCLYKY FPFGGLQRDF MRIAQTVAAR GHHVRVYTQS WEGECPDVFE LIKVPVNSHT
NHGRNAEYFA WVQKHLREHP VDRVVGFNKM PGLDVYYAAD VCYAEKVAQE KGFFYRLTSR
YRHYAAFERA TFEQGKPTQL LMLTDKQIAD FQKHYQTEAE RFHILPPGIY PDRKYSQQPA
NSREIFRKKN GITEQQYLLL QVGSDFTRKG VDRSIEALAS LPDSLRHNTL LYVVGQDKPR
KFEALAEKRG VRSNVHFFSG RNDVSELMAA ADLLLHPAYQ EAAGIVLLEA ITAGLPVLTT
AVCGYAHYIV DANCGEAIAE PFRQETLNEI LRKALTQSSL RQAWAENARH YADTQDLYSL
PEKAADIITG GLDG
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