Gene EcSMS35_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3948 
Symbol 
ID6146533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4025801 
End bp4026232 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content50% 
IMG OID641618774 
Productrhodanese domain-containing protein 
Protein accessionYP_001745913 
Protein GI170679980 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.848224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAA TTATGCAATT TGTTGGCCGT CATCCCATAC TGAGTATCGC CTGGATCGCG 
TTACTGGTGG CGGTTCTTGT GACTACGTTT AAGAGCCTGA CCTCGAAAGT GAAGGTGATT
ACTCGTGGTG AAGCTACGCG TCTGATCAAC AAAGAAGACG CTGTGGTTGT GGATTTACGT
CAGCGTGATG ACTTCCGTAA AGGCCATATC GCAGGTTCTA TCAACCTGTT GCCGAGCGAA
ATCAAAGCCA ACAATGTTGG TGAGCTTGAG AAGCACAAAG ACAAACCGGT TATCGTGGTA
GATGGTTCTG GCATGCAGTG CCAGGAGCCT GCAAACGCGC TGACGAAAGC TGGTTTTGCG
CAAGTATTCG TGCTGAAAGA GGGCGTTGCT GGCTGGGCTG GCGAAAACTT ACCTCTGGTG
CGCGGCAAAT AA
 
Protein sequence
MQEIMQFVGR HPILSIAWIA LLVAVLVTTF KSLTSKVKVI TRGEATRLIN KEDAVVVDLR 
QRDDFRKGHI AGSINLLPSE IKANNVGELE KHKDKPVIVV DGSGMQCQEP ANALTKAGFA
QVFVLKEGVA GWAGENLPLV RGK