| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3945 |
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| Symbol | gpsA |
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| ID | 6146824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4023859 |
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| End bp | 4024878 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641618771 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001745910 |
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| Protein GI | 170683136 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.874691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAC GTAATGCTTC AATGACTGTG ATCGGTGCCG GCTCGTACGG CACCGCTCTT
GCCATCACCC TGGCAAGAAA TGGCCACGAG GTTGTCCTCT GGGGCCATGA CCCTGAACAT
ATCGCAACGC TTGAACGCGA CCGCTGTAAC GCCGCGTTTC TCCCCGATGT GCCTTTTCCC
GATACGCTCC ATCTTGAAAG CGATCTCGCC ACTGCGCTGG CAGCCAGCCG TAATATTCTC
GTTGTCGTAC CCAGCCATGT CTTTGGTGAA GTGCTGCGCC AGATTAAACC GCTGATGCGT
CCTGATGCGC GTCTGGTGTG GGCGACCAAA GGGCTGGAAG CAGAAACCGG ACGTCTGTTA
CAGGACGTGG CGCGTGAGGC CTTAGGCGAT CAAATTCCGT TGGCGGTTAT CTCTGGCCCA
ACGTTTGCGA AAGAACTGGC GGCAGGTTTA CCGACGGCCA TTTCGCTGGC CTCGACGGAC
CAGACCTTTG CCGATGACCT CCAGCAATTG CTGCACTGTG GCAAAAGTTT CCGCGTTTAC
AGCAATCCGG ATTTCATTGG CGTGCAGCTT GGCGGCGCGG TGAAAAACGT CATTGCCATT
GGCGCGGGGA TGTCCGACGG TATCGGTTTT GGTGCGAATG CGCGTACGGC GCTGATCACC
CGTGGACTGG CTGAAATGTC GCGTCTTGGC GCGGCGCTGG GTGCCGATCC TGCCACCTTT
ATGGGCATGG CGGGGCTGGG CGATCTGGTG CTTACCTGTA CCGACAACCA GTCGCGTAAC
CGCCGTTTTG GCATGATGCT CGGTCAGGGC ATGGATGTAC AAAGCGCGCA GGAGAAAATT
GGTCAGGTGG TGGAAGGCTA CCGCAATACG AAAGAAGTCC GCGAACTGGC GCATCGCTTC
GGCGTTGAAA TGCCAATAAC CGAGGAAATT TATCAAGTAT TATATTGCGG AAAAAACGCG
CGCGAGGCAG CATTGACTTT ACTAGGTCGT GCACGCAAGG ACGAGCGCAG CAGCCACTAA
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| Protein sequence | MNQRNASMTV IGAGSYGTAL AITLARNGHE VVLWGHDPEH IATLERDRCN AAFLPDVPFP
DTLHLESDLA TALAASRNIL VVVPSHVFGE VLRQIKPLMR PDARLVWATK GLEAETGRLL
QDVAREALGD QIPLAVISGP TFAKELAAGL PTAISLASTD QTFADDLQQL LHCGKSFRVY
SNPDFIGVQL GGAVKNVIAI GAGMSDGIGF GANARTALIT RGLAEMSRLG AALGADPATF
MGMAGLGDLV LTCTDNQSRN RRFGMMLGQG MDVQSAQEKI GQVVEGYRNT KEVRELAHRF
GVEMPITEEI YQVLYCGKNA REAALTLLGR ARKDERSSH
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