Gene EcSMS35_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3931 
Symbol 
ID6146667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4007027 
End bp4007491 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content51% 
IMG OID641618757 
Producthypothetical protein 
Protein accessionYP_001745896 
Protein GI170684003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.790566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGAA TCGCCAACCC GGATTATTGT CAAAATATCA GCCCGACTCC CATCTGGCTG 
CCAGCCAAAA ACAACACTGA TAAACGTGAA TCCGAGGCAG ATATGTTTCT AAACTACTTC
GCGTTGGGAG TGCTGATCTT CGTCTTTCTG GTGATTTTTT ATGGAATCAT CGCGATACAT
GACATCCCTT ATCTGATTGC CAAAAAGCGT AATCACCCCC ATGCCGACGC TATTCATACA
GCGGGCTGGG TGAGCCTGTT TACTCTGCAT GTTATCTGGC CGTTCCTGTG GATCTGGGCG
ACGCTCTATC AACCGGAGCG TGGCTGGGGT ATGCAGTCAC ATGTTGCGTC GCAGGAGAAA
GCGACTGACC CGGAAATCGC CGCACTTTCT GACCGAATTT CCCGGCTGGA GCATCAACTC
GCCGCCGAGA AAAAGACTGA CTATTCCACG TTCCCGGAGA TCTAA
 
Protein sequence
MARIANPDYC QNISPTPIWL PAKNNTDKRE SEADMFLNYF ALGVLIFVFL VIFYGIIAIH 
DIPYLIAKKR NHPHADAIHT AGWVSLFTLH VIWPFLWIWA TLYQPERGWG MQSHVASQEK
ATDPEIAALS DRISRLEHQL AAEKKTDYST FPEI