| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3919 |
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| Symbol | selA |
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| ID | 6145567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3991534 |
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| End bp | 3992925 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641618745 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_001745884 |
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| Protein GI | 170680855 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.419812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCG AAACGCGTTC CCTCTATAGT CAACTTCCGG CTATTGATCG CTTATTGCGC
GATAGCTCCT TCCTTTCTTT GCGTGATACT TATGGTCACA CCCGCGTGGT GGAATTGTTG
CGTCAGATGC TCGACGAAGC GCGAGAAGTG ATTCGTGGCA GCCAGACGCT GCCCGCATGG
TGTGAAAACT GGGCGCAAGA AGTTGATGCC CGGTTGACGA AAGAGGCGCA AAGCGCGCTG
CGTCCGGTGA TCAACCTGAC GGGAACCGTG CTGCATACCA ACCTTGGGCG AGCTTTACAG
GCGGAAGCCG CGGTGGAAGC CGTTACGAAG GCTATGCGTT CGCCAGTGAC CCTCGAGTAC
GATCTGGACG ACGCCGGACG CGGACATCGC GATCGGGCGC TGGCGCAGCT GCTGTGCCGT
ATTACGGGGG CGGAAGATGC CTGTATCGTT AATAACAATG CGGCGGCGGT GTTATTGATG
TTGGCGGCCA CTGCCAGCGG GAAAGAGGTG GTGGTTTCTC GCGGCGAACT GGTGGAGATT
GGCGGCGCGT TTCGTATTCC TGATGTCATG CGTCAGGCAG GCTGCACCCT ACACGAAGTG
GGGACCACCA ACCGCACGCA CGCTAATGAT TATCGCCAGG CGGTGAATGA AAATACCGCG
CTGTTGATGA AAGTACATAC CAGTAACTAC AGCATTCAGG GATTCACCAA AGCGATAGAT
GAAGCGGAAC TGGTGGCGCT CGGCAAAGAG CTGGATGTCC CCGTAGTGAC TGATTTAGGC
AGTGGCTCGC TGGTCGATCT TAGCCAGTAC GGTTTGCCGA AAGAGCCAAT GCCGCAGGAG
TTGATTGCGG CGGGCGTCAG TCTGGTGAGC TTCTCCGGCG ACAAGTTGTT AGGCGGGCCG
CAGGCAGGAA TTATTGTTGG TAAAAAAGAG ATGATCGCCC GACTGCAAAG CCACCCGCTG
AAGCGTGCAT TACGCGCGGA TAAAATGACC CTTGCGGCGC TGGAAGCCAC GTTGCGTCTT
TATTTACACC CTGAAGCTCT GAGTAAAAAA TTACCGACCC TGCGCCTGCT TACCCGCAGC
GCAGAGGTCA TTCAAATCCA GGCACAACGT TTACAGGCTC CCCTTGCCGC ACATTACGGC
GCGGAGTTTG CGGTACAGGT TATGCCATGT CTTTCGCAGA TTGGCAGTGG TTCGCTGCCG
GTTGATCGCC TGCCGAGCGC GGCATTAACG TTTACACCCC ATGATGGACG CGGTAGCCAC
CTTGAGTCAT TAGCCGCCCG CTGGCGTGAA TTGCCAGTGC CGGTGATTGG TCGTATTTAT
GACGGACGAT TGTGGCTGGA TTTACGCTGC CTTGAAGATG AGCAACGGTT TTTGGAGATG
TTGTTGAAAT GA
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| Protein sequence | MTTETRSLYS QLPAIDRLLR DSSFLSLRDT YGHTRVVELL RQMLDEAREV IRGSQTLPAW
CENWAQEVDA RLTKEAQSAL RPVINLTGTV LHTNLGRALQ AEAAVEAVTK AMRSPVTLEY
DLDDAGRGHR DRALAQLLCR ITGAEDACIV NNNAAAVLLM LAATASGKEV VVSRGELVEI
GGAFRIPDVM RQAGCTLHEV GTTNRTHAND YRQAVNENTA LLMKVHTSNY SIQGFTKAID
EAELVALGKE LDVPVVTDLG SGSLVDLSQY GLPKEPMPQE LIAAGVSLVS FSGDKLLGGP
QAGIIVGKKE MIARLQSHPL KRALRADKMT LAALEATLRL YLHPEALSKK LPTLRLLTRS
AEVIQIQAQR LQAPLAAHYG AEFAVQVMPC LSQIGSGSLP VDRLPSAALT FTPHDGRGSH
LESLAARWRE LPVPVIGRIY DGRLWLDLRC LEDEQRFLEM LLK
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