Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3904 |
Symbol | sgbH |
ID | 6144064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3974648 |
End bp | 3975310 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641618730 |
Product | 3-keto-L-gulonate-6-phosphate decarboxylase |
Protein accession | YP_001745869 |
Protein GI | 170684279 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0269] 3-hexulose-6-phosphate synthase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAC CACTTCTGCA ACTGGCCCTC GACCACTCAT CACTTGAAGA CGCACAGCGC GACGTGATGC TGTTAAAAGG CAGCGTCGAT ATCGTCGAAG CGGGCACCAT TCTCTGTTTA AACGAAGGGC TTGGCGCGGT GAAAGCCTTG CGCGAACAGT GCCCGGATAA AATCATCGTT GCTGACTGGA AGGTCGCCGA CGCGGGTGAA ACGCTCGCAC AACAGGCGTT TGGCGCGGGT GCCAACTGGA TGACCATCAT CTGCGCTGCG CCGCTCGCGA CGGTGGAAAA AGGCCACGCC ATGGCGCAAC GCTGCGGTGG TGAAATTCAG ATAGAGCTGT TCGGTAACTG GACGCTGGAC GACGCCCGCG ACTGGCATCG TCTTGGCGTG CGGCAGGCCA TTTATCATCG CGGTCGCGAC GCGCAGGCCA GCGGGCAACA GTGGGGCGAG GCCGATCTGG CACGCATGAA GGCGCTTTCC GATATCGGCC TTGAGCTTTC CATTACCGGC GGGATTACCC CTGCTGACCT GCCGCTGTTT AAAGATATCC GCGTGAAAGC CTTTATTGCC GGGCGGGCGC TGGCAGGCGC AGCAAATCCG GCGCAGGTGG CTGGCGATTT CCATGCACAA ATTGATGCCA TCTGGGGAGG TGCGCGTGCG TAA
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Protein sequence | MSRPLLQLAL DHSSLEDAQR DVMLLKGSVD IVEAGTILCL NEGLGAVKAL REQCPDKIIV ADWKVADAGE TLAQQAFGAG ANWMTIICAA PLATVEKGHA MAQRCGGEIQ IELFGNWTLD DARDWHRLGV RQAIYHRGRD AQASGQQWGE ADLARMKALS DIGLELSITG GITPADLPLF KDIRVKAFIA GRALAGAANP AQVAGDFHAQ IDAIWGGARA
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