| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3903 |
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| Symbol | lyx |
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| ID | 6143850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3973155 |
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| End bp | 3974651 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641618729 |
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| Product | cryptic L-xylulose kinase |
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| Protein accession | YP_001745868 |
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| Protein GI | 170679902 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.783257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAT ACTGGCTGGG GTTAGATTGT GGCGGTAGCT GGCTGAAAGC CGGGCTGTAT
GACCGCGAAG GCCGGGAGGC AGGCGTGCAG CGCCTGCCGC TGTGCGCATT AAGCCCGCAG
CCAGGCTGGG CAGAGCGCGA TATGGCAGAA CTGTGGCAAT GCTGCATGGC TGTCATTCGC
ACCCTGCTTA CTCATTCTGG TGTCAGCGGG GAGCAAATAG TGGGTATCGG TATCTCCGCA
CAGGGAAAGG GCTTGTTTTT GCTGGATAAA AACGACAAGC CGCTCGGGAA TGCTATTTTG
TCCTCGGACC GCCGGGCGAT GGAAATCGTT CGTCGCTGGC AGGAAGATGG CATCCCGGAA
AAACTCTACC CGCTGACCCG ACAAACCTTG TGGACCGGGC ATCCGGTGTC GCTGTTACGC
TGGCTGAAAG AGCACGAACC GGAACGCTAC GCGCAAATTG GCTGCGTAAT GATGACGCAC
GACTATCTGC GCTGGTGTTT AACCGGCGTC AAAGGTTGCG AAGAGAGCAA TATTTCCGAG
TCCAACCTCT ACAACATGAG TCTTGAGGAA TATGACCCGT GCCTCACCGA CTGGCTGGGG
ATCGCTGAAA TCAACCACGC CCTGCCGCCT GTTGTCGGAT CTGCCGAAAT TTGCGGGGAA
ATCACCGCTC AGACAGCCGC ACTGACCGGT CTGAAAGCGG GTACGCCCGT TGTCGGCGGC
CTGTTTGATG TGGTTTCCAC CGCACTCTGT GCCGGGATCG AAGACGAATT TACCCTCAAT
GCGGTGATGG GCACCTGGGC GGTGACCAGC GGCATAACCC GTGGTTTACG TGACGGTGAA
GCGCATCCGT ATGTCTATGG TCGCTACGTT AACGATGGTC AATTTATCGT TCACGAAGCC
AGCCCCACCT CTTCCGGCAA CCTCGAATGG TTTACCGCAC AGTGGGGAGA AATCTCGTTT
GATGAGATTA ACCAGGCCGT TGCCAGCTTG CCGAAGGCCG GGGGCGATCT CTTTTTCCTG
CCGTTCCTGT ACGGCAGCAA CGCCGGATTG GAGATGACCA GCGGTTTCTA CGGGATGCAG
GCCATTCATA CCCGCGCACA CCTGTTGCAG GCCATTTATG AAGGCGTGGT GTTCAGCCAT
ATGACCCATC TCAACCGGAT GCGCGAACGT TTTACTGATG TGCACACCCT GCGCGTCACT
GGCGGCCCGG CGCATTCCGA TGTCTGGATG CAAATGCTGG CGGACGTCAG CGGTCTGCGT
ATCGAGCTGC CGCAGGTGGA AGAAACCGGC TGCTTTGGTG CGGCACTTGC CGCCCGCGTC
GGCACCGGAG TTTATCGCGA TTTCAGCGAA GCCCAACGTG ATTTACAGCA CCCGGTACGC
ACCCTGCTGC CGGATATGAC CGCACATCAG CTTTACCAAC AAAAATACCA ACGCTATCAG
CATCTCATTG CCGCACTTGA GGGCTTTCAC GCCCGCATCA AGGAGCACAC ATTATGA
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| Protein sequence | MTQYWLGLDC GGSWLKAGLY DREGREAGVQ RLPLCALSPQ PGWAERDMAE LWQCCMAVIR
TLLTHSGVSG EQIVGIGISA QGKGLFLLDK NDKPLGNAIL SSDRRAMEIV RRWQEDGIPE
KLYPLTRQTL WTGHPVSLLR WLKEHEPERY AQIGCVMMTH DYLRWCLTGV KGCEESNISE
SNLYNMSLEE YDPCLTDWLG IAEINHALPP VVGSAEICGE ITAQTAALTG LKAGTPVVGG
LFDVVSTALC AGIEDEFTLN AVMGTWAVTS GITRGLRDGE AHPYVYGRYV NDGQFIVHEA
SPTSSGNLEW FTAQWGEISF DEINQAVASL PKAGGDLFFL PFLYGSNAGL EMTSGFYGMQ
AIHTRAHLLQ AIYEGVVFSH MTHLNRMRER FTDVHTLRVT GGPAHSDVWM QMLADVSGLR
IELPQVEETG CFGAALAARV GTGVYRDFSE AQRDLQHPVR TLLPDMTAHQ LYQQKYQRYQ
HLIAALEGFH ARIKEHTL
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