| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3895 |
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| Symbol | avtA |
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| ID | 6143413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3965775 |
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| End bp | 3967028 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618721 |
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| Product | valine--pyruvate transaminase |
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| Protein accession | YP_001745860 |
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| Protein GI | 170683665 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTCT CCCTTTTTGG TGACAAATTT ACCCGCCACT CCGGCATTAC GCTGCTGATG
GAAGATCTGA ACGACGGTTT ACGCACGCCT GGCGCGATTA TGCTCGGCGG CGGTAATCCA
GCGCAGATCC CGGAAATGCA GGACTACTTC CAGACGCTAC TGACCGACAT GCTGGAAAGT
GGCAAAGCGA CTGATGCACT GTGCAATTAC GACGGTCCAC AGGGGAAAAC GGAGCTACTC
ACACTGCTTG CCGGAATGCT GCGCGAGAAG TTGGGTTGGG ATATCGAACC ACAGAATATT
GCACTAACAA ACGGCAGCCA GAGCGCGTTT TTCTACTTAT TTAATCTGTT TGCCGGACGC
CGTGCCGATG GTCGGATCAA AAAAGTGCTG TTTCCGCTGG CACCGGAATA TATTGGCTAC
GCTGACGCCG GACTGGAAGA AGATCTGTTT GTCTCTGCGC GTCCGAATAT TGAACTGCTG
CCGGAAGGCC AGTTTAAATA CCACGTCGAT TTTGAGCATC TGCATATTGG CGAAGAAACC
GGGATGATTT GCGTCTCCCG GCCGACGAAT CCAACAGGCA ATGTGATTAC TGACGAAGAG
TTGCTGAAGC TTGACGCGCT GGCGAATCAA CACGGCATTC CGCTGGTGAT TGATAACGCT
TATGGCGTCC CGTTCCCGGG TATCATCTTC AGCGAAGCGC GCCCGCTGTG GAATCCGAAT
ATTGTACTGT GCATGAGTCT TTCCAAGCTG GGACTACCGG GTTCGCGCTG CGGCATTATC
ATCGCCAATG AAAAAATCAT CACCGCAATC ACCAACATGA ACGGCATTAT CAGCCTGGCG
CCTGGCGGTA TTGGTCCGGC GATAATGTGT GAAATGATTA AGCGTAACGA TCTGCTGCGC
CTGTCTGAAA CGGTTATCAA ACCGTTTTAT TACCAGCGTG TTCAGGAAAC TATCGCCATC
ATTCGCCGCT ATTTACCGGA AGATCGCTGC CTGATTCATA AACCGGAAGG AGCCATTTTC
CTCTGGCTAT GGTTTAAGGA TTTGCCAATT ACGACCGAGC AGCTCTACCA GCGCCTGAAA
GCACGGGGCG TGCTGATGGT GCCGGGGCAC AACTTCTTCC CAGGGCTGGA TAAACCGTGG
CCACATACAC ATCAATGTAT GCGCATGAAC TACGTGCCGG AGCCGGATAA AATTGAGGCG
GGGGTGAAGA TTCTGGCGGA AGAGATTGAA CGCGCCTGGG CTGAAAGTCA TTAA
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| Protein sequence | MTFSLFGDKF TRHSGITLLM EDLNDGLRTP GAIMLGGGNP AQIPEMQDYF QTLLTDMLES
GKATDALCNY DGPQGKTELL TLLAGMLREK LGWDIEPQNI ALTNGSQSAF FYLFNLFAGR
RADGRIKKVL FPLAPEYIGY ADAGLEEDLF VSARPNIELL PEGQFKYHVD FEHLHIGEET
GMICVSRPTN PTGNVITDEE LLKLDALANQ HGIPLVIDNA YGVPFPGIIF SEARPLWNPN
IVLCMSLSKL GLPGSRCGII IANEKIITAI TNMNGIISLA PGGIGPAIMC EMIKRNDLLR
LSETVIKPFY YQRVQETIAI IRRYLPEDRC LIHKPEGAIF LWLWFKDLPI TTEQLYQRLK
ARGVLMVPGH NFFPGLDKPW PHTHQCMRMN YVPEPDKIEA GVKILAEEIE RAWAESH
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