| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3888 |
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| Symbol | xylA |
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| ID | 6145005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3955601 |
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| End bp | 3956923 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641618714 |
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| Product | xylose isomerase |
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| Protein accession | YP_001745853 |
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| Protein GI | 170681343 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCT ATTTTGACCA GCTCGATCGC GTTCGTTATG AAGGCTCAAA ATCCTCAAAC
CCGTTAGCAT TCCGTCACTA CAATCCCGAC GAACTGGTGT TGGGCAAGCG TATGGAAGAG
CATTTGCGTT TTGCCGCCTG CTACTGGCAC ACCTTCTGCT GGAACGGGGC GGATATGTTT
GGTGTGGGGG CGTTTAATCG TCCGTGGCAG CAGCCTGGTG AGGCACTGGC GTTGGCGAAG
CGTAAAGCAG ATGTCGCATT TGAGTTTTTC CACAAGTTAC ATGTGCCATT TTATTGCTTC
CACGATGTAG ATGTTTCCCC TGAGGGCGCG TCGTTAAAAG AGTACATCAA TAATTTTGCG
CAAATGGTTG ATGTCCTGGC AGGCAAGCAA GAAGAGAGCG GCGTGAAGCT GCTGTGGGGA
ACTGCTAACT GCTTTACAAA CCCTCGCTAT GGCGCGGGTG CGGCGACGAA CCCAGATCCT
GAAGTCTTCA GTTGGGCGGC AACGCAAGTT GTTACAGCGA TGGAAGCAAC CCATAAATTG
GGCGGTGAAA ACTATGTCCT GTGGGGTGGT CGTGAAGGTT ACGAAACGCT GTTAAATACC
GACTTGCGCC AGGAGCGTGA ACAGCTGGGC CGCTTTATGC AGATGGTGGT TGAGCATAAA
CATAAAATCG GTTTCCAGGG CACGTTGCTT ATCGAACCGA AACCGCAAGA ACCGACCAAA
CATCAATATG ATTACGATGC TGCGACGGTC TATGGCTTCC TGAAACAGTT TGGTCTGGAA
AAAGAGATTA AACTGAATAT TGAAGCTAAC CACGCGACGC TGGCAGGTCA CTCTTTCCAT
CATGAAATAG CCACCGCCAT TGCGCTTGGC CTGTTCGGTT CTGTCGACGC CAACCGTGGC
GATGCGCAAC TGGGCTGGGA CACCGACCAG TTCCCGAACA GTGTGGAAGA GAATGCGCTG
GTGATGTATG AAATTCTCAA AGCAGGCGGT TTCACCACCG GTGGTCTGAA CTTCGATGCC
AAAGTACGTC GTCAAAGTAC TGATAAATAT GATCTGTTTT ACGGTCATAT CGGCGCGATG
GATACGATGG CGTTGGCGCT GAAAATTGCA GCGCGCATGA TTGAAGATGG CGAGCTGGAT
AAACGCATCG CGCAGCGTTA TTCCGGCTGG AATAGCGAAT TAGGCCAGCA AATCCTGAAA
GGCCAAATGT CACTGGCAGA TTTAGCCAAA TATGCTCAGG AACATAATTT GTCTCCGGTG
CATCAGAGTG GTCGCCAGGA GCAACTGGAA AATCTGGTAA ATCATTATCT GTTCGACAAA
TAA
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| Protein sequence | MQAYFDQLDR VRYEGSKSSN PLAFRHYNPD ELVLGKRMEE HLRFAACYWH TFCWNGADMF
GVGAFNRPWQ QPGEALALAK RKADVAFEFF HKLHVPFYCF HDVDVSPEGA SLKEYINNFA
QMVDVLAGKQ EESGVKLLWG TANCFTNPRY GAGAATNPDP EVFSWAATQV VTAMEATHKL
GGENYVLWGG REGYETLLNT DLRQEREQLG RFMQMVVEHK HKIGFQGTLL IEPKPQEPTK
HQYDYDAATV YGFLKQFGLE KEIKLNIEAN HATLAGHSFH HEIATAIALG LFGSVDANRG
DAQLGWDTDQ FPNSVEENAL VMYEILKAGG FTTGGLNFDA KVRRQSTDKY DLFYGHIGAM
DTMALALKIA ARMIEDGELD KRIAQRYSGW NSELGQQILK GQMSLADLAK YAQEHNLSPV
HQSGRQEQLE NLVNHYLFDK
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