| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3887 |
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| Symbol | xylB |
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| ID | 6144582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3954075 |
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| End bp | 3955529 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618713 |
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| Product | xylulokinase |
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| Protein accession | YP_001745852 |
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| Protein GI | 170680828 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATATCG GGATAGATCT TGGCACCTCG GGCGTAAAAG TTATTTTGCT CAATGAGCAG
GGTGAGGTGG TTGCTGCGCA AACGGAAAAG CTGACCGTTT CGCGCCCGCA TCCACTCTGG
TCGGAACAAG ACCCGGAACA GTGGTGGCAG GCAACTGATC GCGCAATGAA AGCTCTGGGC
GTTCAGCATT CTCTGCAAGA CGTTAAAGCA TTAGGTATTG CCGGACAGAT GCACGGTGCA
ACCTTACTGG ATGCCCAGCA ACGGGTATTA CGCCCTGCCA TTTTGTGGAA CGACGGGCGC
TGTGCGCAAG AGTGCACTTT GCTGGAAGCG CGAGTTCCGC AATCACGGGT GATTACCGGT
AACCTGATGA TGCCCGGATT TACTGCGCCT AAATTGCTAT GGGTTCATCG GCATGAGCCG
GAGATATTCC GTCAAATCGA TAAAGTATTA TTACCGAAAG ATTACTTGCG TCTGCGTATG
ACGGGGGAGT TTGCCAGCGA TATGTCTGAC GCAGCTGGCA CTATGTGGCT GGATGTCGCA
AAGCGTGACT GGAGCGATCT CATGCTGCAG GCTTGCCACT TATCTCGTGA CCAGATGCCC
GCATTATACG AAGGCAGCGA AATTACTGGT GCTTTGCTAC CTGAAGTTGC GAAAGCGTGG
GGTATGGCGA CGGTGCCAGT TGTCGCAGGC GGTGGCGATA ATGCAGCTGG TGCGGTTGGT
GTGGGAATGG TTGATGCTAA TCAGGCAATG TTATCGCTGG GGACGTCGGG GGTCTATTTT
GCTGTCAGCG AAGGATTCTT AAGCAAGCCA GAAAGCGCCG TACACAGCTT TTGCCATGCG
CTCCCGCAGC GTTGGCATTT AATGTCTGTG ATGCTGAGTG CGGCTTCTTG CCTGGATTGG
GCCGCAAAAT TAACCGGTCT GAGCAATGTT CCAGCTTTAA TCGCGGCTGC TCAACAGGCT
GATGAAAGTA CCGAGCCTGT CTGGTTTCTG CCTTATCTTT CCGGTGAACG TACGCCACAC
AACAATCCCC AGGCGAAGGG GGTTTTCTTT GGTTTGACCC ATCAACATGG TGCTAATGAA
CTGGCGCGAG CAGTGCTGGA AGGCGTGGGT TATGCGCTGG CAGATGGCAT GGATGTCGTA
CATGCCTGCG GCATTAAACC GCAAAGTGTT ACGCTGATTG GTGGCGGGGC TCGTAGTGAG
TACTGGCGTC AGATGCTGGC GGATATCAGC GGTCAGCAGC TCGATTACCG CACAGGGGGA
GATGTGGGGC CAGCACTGGG TGCAGCAAGG CTGGCGCAGA TTGCGACGAA TCCAGAGAAA
TCGCTCATTG AATTGTTGCC ACAACTACCG TTAGAACAGT CGCATCTACC AGATGCGCAG
CGTTATGCCG CTTATCAGCC ACGACGAGAA ACGTTCCGTC GCCTCTATCA GCAACTTCTG
CCATTAATGG CGTAA
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| Protein sequence | MYIGIDLGTS GVKVILLNEQ GEVVAAQTEK LTVSRPHPLW SEQDPEQWWQ ATDRAMKALG
VQHSLQDVKA LGIAGQMHGA TLLDAQQRVL RPAILWNDGR CAQECTLLEA RVPQSRVITG
NLMMPGFTAP KLLWVHRHEP EIFRQIDKVL LPKDYLRLRM TGEFASDMSD AAGTMWLDVA
KRDWSDLMLQ ACHLSRDQMP ALYEGSEITG ALLPEVAKAW GMATVPVVAG GGDNAAGAVG
VGMVDANQAM LSLGTSGVYF AVSEGFLSKP ESAVHSFCHA LPQRWHLMSV MLSAASCLDW
AAKLTGLSNV PALIAAAQQA DESTEPVWFL PYLSGERTPH NNPQAKGVFF GLTHQHGANE
LARAVLEGVG YALADGMDVV HACGIKPQSV TLIGGGARSE YWRQMLADIS GQQLDYRTGG
DVGPALGAAR LAQIATNPEK SLIELLPQLP LEQSHLPDAQ RYAAYQPRRE TFRRLYQQLL
PLMA
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