Gene EcSMS35_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3878 
SymbolhokA 
ID6143028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3946598 
End bp3946750 
Gene Length153 bp 
Protein Length50 aa 
Translation table11 
GC content36% 
IMG OID641618704 
Productsmall toxic polypeptide 
Protein accessionYP_001745843 
Protein GI170683209 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.911707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGA AATATAGATT ACTTTCTTTA ATAGTGATTT GTTTCACGCT TTTATTTTTC 
ACCTGGATGA TAAGAGATTC ACTGTGTGAA TTGCATATTA AACAGGGGAG TTATGAGCTG
GCGGCGTTTT TAGCCTGCAA ATTGAAAGAG TAA
 
Protein sequence
MPQKYRLLSL IVICFTLLFF TWMIRDSLCE LHIKQGSYEL AAFLACKLKE