Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3874 |
Symbol | tkrA |
ID | 6145008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3943458 |
End bp | 3944432 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641618700 |
Product | 2-ketogluconate reductase |
Protein accession | YP_001745839 |
Protein GI | 170680157 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGT CCGTTATCCT CTACAAAGCC TTACCTGATG ATTTACTGCA ACGCCTGCAA GAACATTTCA CCGTTCACCA GGTGGCAAAC CTCAGCCCAC AAACCGTCGA ACAAAATGCA GCAATTTTTG CCGAAGCTGA AGGCTTGCTG GGTTCAAATG AGAATGTTGA TGCCGCATTG CTGGAAAAAA TGCCGAAACT GCGTGCCACA TCAACGATCT CCGTCGGCTA TGACAATTTT GATGTCGATG CGCTTACCGC CCGAAAAATT CTGCTGATGC ACACACCAAC CGTATTAACA GAAACCGTCG CCGATACGCT GATGGCGCTG GTGTTGTCTA CCGCTCGTCG GGTTGTGGAG GTAGCAGAAC GGGTAAAAGC AGGCGAATGG ACCGCGAGCA TAGGCCCGGA CTGGTACGGC ACTGACGTTC ACCATAAAAC ACTGGGCATT GTCGGGATGG GACGGATCGG CATGGCGCTG GCACAACGTG CGCAATTTGG CTTCAACATG CCCATCCTCT ATAACGCACG TCGCCACCAT AAAGAAGCAG AAGAACGCTT CAACGCCCGC TACTGCGATT TGGATACACT GTTACAAGAG TCAGATTTCG TTTGCCTGAT CCTGCCGTTA ACTGATGAAA CGCATCATCT GTTTGGCGCA GAACAATTCG CCAAAATGAA ATCCTCCGCT ATTTTCATTA ATGCCGGACG TGGCCCGGTG GTTGATGAAA ATGCACTGAT TGCTGCATTG CAGAAAGGGG AAATTCACGC CGCCGGGCTG GATGTCTTCG AACAAGAGCC ACTGTCTGTA GATTCGCCGT TGCTCTCAAT GGCCAACGTC GTCGCAGTAC CGCATATTGG ATCTGCCACC CATGAGACGC GTTATGGCAT GGCCGCCTGT GCCGTGGATA ATTTGATTGA TGCGTTACAA GGAAAGGTTG AGAAGAACTG TGTGAATCCG CACGTCGCGG ACTAA
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Protein sequence | MKPSVILYKA LPDDLLQRLQ EHFTVHQVAN LSPQTVEQNA AIFAEAEGLL GSNENVDAAL LEKMPKLRAT STISVGYDNF DVDALTARKI LLMHTPTVLT ETVADTLMAL VLSTARRVVE VAERVKAGEW TASIGPDWYG TDVHHKTLGI VGMGRIGMAL AQRAQFGFNM PILYNARRHH KEAEERFNAR YCDLDTLLQE SDFVCLILPL TDETHHLFGA EQFAKMKSSA IFINAGRGPV VDENALIAAL QKGEIHAAGL DVFEQEPLSV DSPLLSMANV VAVPHIGSAT HETRYGMAAC AVDNLIDALQ GKVEKNCVNP HVAD
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