| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3859 |
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| Symbol | dppF |
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| ID | 6146528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3928336 |
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| End bp | 3929340 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641618685 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_001745825 |
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| Protein GI | 170680787 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.712136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACGC AAGAGGCCAC CTCGCAACAA CCGCTGTTGC AGGCTATCGA CCTGAAAAAA
CATTATCCGG TGAAGAAAGG TATGTTCGCG CCGGAACGTC TGGTGAAGGC GCTGGACGGC
GTTTCGTTTA ACCTTGAACG TGGCAAAACG CTGGCAGTAG TAGGTGAATC TGGCTGCGGT
AAATCGACCC TCGGTCGGTT ACTGACGATG ATCGAAACGC CCACCGGTGG TGAGCTGTAT
TACCAGGGGC AGGATCTGCT CAAGCACGAT CCGCAGGCGC AGAAGTTGCG TCGGCAGAAA
ATCCAGATCG TCTTTCAGAA TCCCTATGGT TCGCTAAATC CGCGTAAAAA AGTTGGGCAA
ATTCTTGAAG AGCCGCTGCT TATTAATACC AGCTTAAGCA AAGATCAGCG TCGGGAAAAA
GCCCTGTCGA TGATGGCGAA AGTCGGCCTG AAAACCGAGC ATTACGACCG CTATCCGCAT
ATGTTCTCCG GCGGTCAGCG TCAGCGTATC GCCATTGCCC GTGGTCTGAT GCTCGACCCG
GATGTGGTGA TTGCCGATGA GCCGGTTTCC GCGCTGGACG TCTCAGTGCG TGCGCAGGTG
CTGAATCTGA TGATGGATTT GCAGCAGGAG TTGGGGCTGT CTTATGTCTT TATCTCCCAC
GACCTGTCAG TGGTTGAGCA CATTGCCGAT GAAGTGATGG TGATGTACCT GGGCCGCTGC
GTGGAGAAGG GAACGAAGGA CCAAATCTTC AATAACCCGC GTCATCCGTA CACTCAGGCG
CTACTCTCCG CGACGCCGCG CCTGAACCCG GACGATCGCC GCGAGCGCAT CAAGCTCACC
GGTGAACTGC CAAGCCCGCT CAATCCACCG CCGGGTTGCG CCTTCAACGC CCGCTGTCGT
CGGCGCTTCG GCCCCTGCAC CCAGTTGCAG CCGCAGCTAA AAGACTACGG CGGTCAACTG
GTAGCTTGTT TTGCTGTTGA TCAGGATGAA AATCCGCAGC GTTAA
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| Protein sequence | MSTQEATSQQ PLLQAIDLKK HYPVKKGMFA PERLVKALDG VSFNLERGKT LAVVGESGCG
KSTLGRLLTM IETPTGGELY YQGQDLLKHD PQAQKLRRQK IQIVFQNPYG SLNPRKKVGQ
ILEEPLLINT SLSKDQRREK ALSMMAKVGL KTEHYDRYPH MFSGGQRQRI AIARGLMLDP
DVVIADEPVS ALDVSVRAQV LNLMMDLQQE LGLSYVFISH DLSVVEHIAD EVMVMYLGRC
VEKGTKDQIF NNPRHPYTQA LLSATPRLNP DDRRERIKLT GELPSPLNPP PGCAFNARCR
RRFGPCTQLQ PQLKDYGGQL VACFAVDQDE NPQR
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