| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3836 |
|---|
| Symbol | dctA |
|---|
| ID | 6146394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3906699 |
|---|
| End bp | 3907985 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641618662 |
|---|
| Product | C4-dicarboxylate transporter DctA |
|---|
| Protein accession | YP_001745802 |
|---|
| Protein GI | 170682606 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.275466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCT CTCTGTTTAA AAGCCTTTAC TTTCAGGTCC TGACAGCGAT AGCCATTGGT
ATTCTCCTTG GCCATTTCTA TCCTGAAATA GGCGAGCAAA TGAAACCGCT TGGCGACGGG
TTCGTTAAGC TCATTAAGAT GATCATCGCT CCTGTCATCT TTTGTACCGT CGTAACGGGC
ATTGCGGGCA TGGAAAGCAT GAAGGCGGTC GGTCGTACCG GCGCAGTCGC ACTGCTTTAC
TTTGAAATTG TCAGTACCAT CGCGCTGATT ATTGGTCTTA TCATCGTTAA CGTCGTGCAG
CCTGGTGCCG GAATGAACGT CGATCCGGCA ACGCTTGATG CGAAAGCGGT AGCGGTTTAC
GCCGATCAGG CGAAAGACCA GGGCATTGTC GCCTTCATTA TGGATGTCAT CCCGGCGAGC
GTCATTGGCG CATTTGCCAG CGGTAACATT CTGCAGGTGC TGCTGTTTGC CGTACTGTTT
GGTTTTGCGC TCCACCGTCT GGGCAGCAAA GGCCAACTGA TTTTTAACGT GATCGAAAGT
TTCTCGCAGG TCATCTTCGG CATCATCAAT ATGATCATGC GTCTGGCACC TATTGGTGCG
TTCGGGGCAA TGGCGTTTAC CATCGGTAAA TACGGCGTCG GCACACTGGT GCAGCTGGGG
CAGCTGATTA TCTGTTTCTA CATTACCTGT ATCCTGTTTG TGGTGCTGGT ATTGGGTTCA
ATCGCTAAAG CGACTGGTTT CAGTATCTTC AAATTTATCC GCTACATCCG TGAAGAACTG
CTGATTGTAC TGGGGACTTC ATCTTCCGAG TCGGCGCTGC CGCGTATGCT CGACAAGATG
GAGAAACTCG GCTGCCGCAA ATCGGTGGTG GGGCTGGTCA TCCCGACAGG CTACTCGTTT
AACCTTGATG GCACATCGAT ATACCTGACA ATGGCGGCAG TGTTTATCGC CCAGGCCACT
AACAGTCAGA TGGATATCGT CCACCAAATC ACGCTGTTAA TCGTGTTGCT GCTTTCTTCT
AAAGGGGCGG CAGGGGTAAC GGGTAGTGGC TTTATCGTGC TGGCGGCGAC GCTCTCTGCG
GTGGGCCATT TGCCGGTAGC GGGTCTGGCG CTGATCCTCG GTATCGACCG CTTTATGTCA
GAAGCTCGTG CGCTGACTAA CCTGGTCGGT AACGGCGTAG CGACCATTGT CGTTGCTAAG
TGGGTGAAAG AACTGGACCA CAAAAAACTG GACGATGTGC TGAATAATCG TGCGCCGGAT
GGCAAAACGC ACGAATTATC CTCTTAA
|
|---|
| Protein sequence | MKTSLFKSLY FQVLTAIAIG ILLGHFYPEI GEQMKPLGDG FVKLIKMIIA PVIFCTVVTG
IAGMESMKAV GRTGAVALLY FEIVSTIALI IGLIIVNVVQ PGAGMNVDPA TLDAKAVAVY
ADQAKDQGIV AFIMDVIPAS VIGAFASGNI LQVLLFAVLF GFALHRLGSK GQLIFNVIES
FSQVIFGIIN MIMRLAPIGA FGAMAFTIGK YGVGTLVQLG QLIICFYITC ILFVVLVLGS
IAKATGFSIF KFIRYIREEL LIVLGTSSSE SALPRMLDKM EKLGCRKSVV GLVIPTGYSF
NLDGTSIYLT MAAVFIAQAT NSQMDIVHQI TLLIVLLLSS KGAAGVTGSG FIVLAATLSA
VGHLPVAGLA LILGIDRFMS EARALTNLVG NGVATIVVAK WVKELDHKKL DDVLNNRAPD
GKTHELSS
|
|---|
| |