| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3828 |
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| Symbol | |
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| ID | 6145094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3896905 |
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| End bp | 3898965 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618654 |
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| Product | AsmA family protein |
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| Protein accession | YP_001745794 |
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| Protein GI | 170680242 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0975888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG CAGGCAAAAT AACCGCTGCG ATTTCAGGGG CTTTCTTGTT GTTGATTGTC
GTGGCGATCA TTTTGATTGC AACTTTTGAC TGGAATCGAC TCAAACCGAC CATCAACCAG
AAAGTCTCTG CGGAGTTGAA TCGTCCGTTC GCTATCCGTG GCGATCTGGG CGTGGTGTGG
GAGCGGCAAA AACAAGAAAC TGGCTGGCGC AGCTGGGTAC CGTGGCCCCA TGTACACGCG
GAAGACATCA TTCTTGGCAA TCCACCGGAT ATTCCCGAAG TCACAATGGT GCATTTGCCG
CGAGTAGAAG CGACGCTGGC CCCGCTGGAG CTGCTGACCA AAACGGTCTG GTTGCCGTGG
ATCAAGCTCG AAAAGCCCGA CGCGCGCCTG ATTCGCCTCT CCGAAAAGAA CAATAACTGG
ACGTTTAATC TCGGCAACGA TGACAACAAA GACGCGAATG CAAAGCCGTC GGCGTGGTCG
TTTCGGCTGG ATAATATTCT GTTCGATCAA GGGCGGATCG CCATTGATGA CAAAGTAAGC
AAAGCGGATC TGGAAATTTT TGTCGATCCG TTAGGCAAGC CGCTGCCGTT CAGCGAAGTT
ACCGGATCGA AAGGTAAAGC GGATAAAGAA AAGGTGGGCG ATTACGTTTT TGGCCTGAAG
GCGCAGGGAC GTTATAACGG TGAACCGCTC ACTGGTACGG GAAAAATAGG CGGTATGCTG
GCGCTGCGTG GCGAAGGTAC GCCGTTTCCG GTACAGGCTG ATTTCCGCTC TGGTAACACC
CGTGTTGCTT TTGATGGCGT TGTGAATGAC CCAATGAAGA TGGGGGGTGT CGATTTACGG
CTTAAATTTT CTGGCGATTC GCTGGGTGAT CTCTATGAAC TGACGGGCGT TCTGCTGCCC
GATACCCCGC CGTTTGAAAC GGATGGTCGG CTGGTAGCGA AAATCGACAC TGAAAAATCG
TCGGTCTTTG ATTATCGCGG TTTTAATGGG CGCATTGGCG ATAGCGATAT CCACGGTTCT
CTGATCTACA CCACCGGCAA GCCACGACCA AAACTGGAAG GTGATGTCGA GTCGCGGCAA
TTGCGGCTGG CGGACCTGGG ACCGTTGATT GGCGTTGATT CCGGGAAAGG AGCTGAAAAG
TCGACACGGT CTGAACAGAA GAAGGGTGAA AAAAGCGTTC AGCCTGCGGG CAAAGTGCTG
CCTTATGACC GCTTCGAAAC CGATAAATGG GATGTCATGG ATGCCGATGT TCGCTTCAAA
GGGCGGCGCA TTGAACATGG CAGTAGCCTG CCGATTAGCG ATCTTTCTAC TCATATCATC
CTCAAAAATG CTGACCTGCG CCTGCAACCG CTGAAATTTG GCATGGCGGG CGGCAGCATT
GCGGCGAATA TTCATCTGGA AGGCGATAAA AAGCCGATGC AGGGGCGGGC AGATATTCAG
GCTCGTCGAC TGAAACTGAA AGAACTGATG CCCGATGTAG AACTGATGCA GAAGACGCTG
GGGGAAATGA ACGGTGACGC GGAACTACGC GGTAGCGGTA ACTCGGTGGC GGCGCTTTTA
GGCAACAGTA ACGGCAACCT GAAACTGTTG ATGAATGACG GGCTGGTGAG CCGCAACCTG
ATGGAGATTG TCGGGCTGAA TGTCGGCAAC TACATTGTCG GTGCGATATT TGGTGACGAT
GAGGTGCGGG TGAACTGCGC GGCGGCGAAT CTTGATATTG CCAACGGCGT GGCGCGCCCG
CAGATCTTTG CTTTCGATAC GGAGAACGCG TTGATTAACG TTACCGGCAC GGCAAGTTTT
GCTTCGGAAC AGCTGGATTT GACTATCGAT CCAGAAAGTA AAGGGATTCG GATTATCACA
CTGCGTTCGC CGCTGTATGT GCGTGGGACG TTTAAAAATC CGCAGGCTGG GGTAAAAGCC
GGACCGTTGA TTGCTCGCGG AGCCGTCGCG GCGGCACTGG CAACGCTGGT TACGCCAGCG
GCGGCGTTAC TGGCGCTGAT CTCTCCTTCC GAAGGGGAGG CTAATCAGTG TCGGACGATT
TTGTCGCAGA TGAAGAAGTG A
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| Protein sequence | MSKAGKITAA ISGAFLLLIV VAIILIATFD WNRLKPTINQ KVSAELNRPF AIRGDLGVVW
ERQKQETGWR SWVPWPHVHA EDIILGNPPD IPEVTMVHLP RVEATLAPLE LLTKTVWLPW
IKLEKPDARL IRLSEKNNNW TFNLGNDDNK DANAKPSAWS FRLDNILFDQ GRIAIDDKVS
KADLEIFVDP LGKPLPFSEV TGSKGKADKE KVGDYVFGLK AQGRYNGEPL TGTGKIGGML
ALRGEGTPFP VQADFRSGNT RVAFDGVVND PMKMGGVDLR LKFSGDSLGD LYELTGVLLP
DTPPFETDGR LVAKIDTEKS SVFDYRGFNG RIGDSDIHGS LIYTTGKPRP KLEGDVESRQ
LRLADLGPLI GVDSGKGAEK STRSEQKKGE KSVQPAGKVL PYDRFETDKW DVMDADVRFK
GRRIEHGSSL PISDLSTHII LKNADLRLQP LKFGMAGGSI AANIHLEGDK KPMQGRADIQ
ARRLKLKELM PDVELMQKTL GEMNGDAELR GSGNSVAALL GNSNGNLKLL MNDGLVSRNL
MEIVGLNVGN YIVGAIFGDD EVRVNCAAAN LDIANGVARP QIFAFDTENA LINVTGTASF
ASEQLDLTID PESKGIRIIT LRSPLYVRGT FKNPQAGVKA GPLIARGAVA AALATLVTPA
AALLALISPS EGEANQCRTI LSQMKK
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