| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3827 |
|---|
| Symbol | |
|---|
| ID | 6145775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3895404 |
|---|
| End bp | 3896726 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641618653 |
|---|
| Product | MFS transporter, metabolite:H+ symporter (MHS) family protein |
|---|
| Protein accession | YP_001745793 |
|---|
| Protein GI | 170680913 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.151355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCAA CAGCCACAAC ACTCGACCAC GAGCAAGAAT ACACGCCGAT CAACTCGCGT
AATAAAGTCC TTGTCGCCTC TCTCATTGGC ACGGCCATTG AGTTCTTCGA CTTTTACATT
TACGCCACTG CGGCCGTTAT TGTGTTTCCG CATATCTTCT TCCCGCAGGG TGATCCTACG
GCAGCAACGC TACAGTCGCT TGCCACCTTC GCCATCGCCT TCGTCGCGCG CCCCATTGGC
TCTGCCGTTT TTGGTCATTT TGGCGATCGC GTTGGGCGTA AAGCGACGCT GGTCGCCTCG
TTGCTAACGA TGGGGATTTC GACCGTGGTG ATTGGTCTGC TGCCGGGCTA TGCCACGATT
GGTATTTTCG CCCCGCTGCT GCTGGCGCTG GCTCGATTTG GTCAGGGTCT GGGTTTAGGC
GGCGAATGGG GCGGCGCGGC GCTGCTGGCG ACTGAAAACG CCCCACCGCG CAAACGTGCA
CTGTATGGCT CCTTCCCGCA GCTGGGCGCA CCGATTGGCT TCTTCTTTGC CAACGGCACT
TTCTTGCTGC TTTCCTGGCT ACTGACCGAC GAGCAGTTTA TGAGCTGGGG CTGGCGCGTG
CCGTTTATCT TCTCGGCGGT GCTGGTCATT ATCGGCCTGT ATGTTCGCGT GTCGCTGCAT
GAGTCGCCGG TGTTTGAGAA AGTCGCTAAA GCGAAAAAAC AGGTGAAGAT CCCGCTGGGT
ACGCTGCTGA CCAAACATGT TCGCGTAACC GTACTGGGTA CGTTCATTAT GCTGGCAACC
TATACGCTGT TTTACATCAT GACGGTCTAC TCTATGACCT TTAGTACCGC CGCCGCGCCA
GTTGGGCTTG GCCTGCCGCG TAACGAAGTG TTGTGGATGC TGATGATGGC AGTTATTGGT
TTTGGCGTGA TGGTGCCAGT CGCCGGATTA CTGGCTGATG CCTTTGGTCG CCGTAAAAGC
ATGGTAATCA TCACCACGCT GATCATCCTG TTCGCGCTGT TCGCCTTTAA CCCGTTGCTC
GGTTCTGGCA ACCCGATTCT GGTTTTTGCC TTCCTGCTGC TGGGGTTAAG TCTGATGGGG
CTGACCTTCG GTCCGATGGG CGCGCTGTTA CCAGAGCTGT TCCCGACAGA AGTGCGTTAC
ACCGGAGCAT CGTTCTCTTA CAACGTATCG TCGATTCTCG GGGCTTCCGT TGCGCCGTAT
ATCGCAGCCT GGTTGCAGAC TAACTACGGG TTAGGTGCGG TGGGGCTATA TCTGGCGGCG
ATGGCTGGCT TGACGTTAAT CGCCCTGCTG CTGACCCATG AGACGCGACA TCAGTCGTTG
TAA
|
|---|
| Protein sequence | MQATATTLDH EQEYTPINSR NKVLVASLIG TAIEFFDFYI YATAAVIVFP HIFFPQGDPT
AATLQSLATF AIAFVARPIG SAVFGHFGDR VGRKATLVAS LLTMGISTVV IGLLPGYATI
GIFAPLLLAL ARFGQGLGLG GEWGGAALLA TENAPPRKRA LYGSFPQLGA PIGFFFANGT
FLLLSWLLTD EQFMSWGWRV PFIFSAVLVI IGLYVRVSLH ESPVFEKVAK AKKQVKIPLG
TLLTKHVRVT VLGTFIMLAT YTLFYIMTVY SMTFSTAAAP VGLGLPRNEV LWMLMMAVIG
FGVMVPVAGL LADAFGRRKS MVIITTLIIL FALFAFNPLL GSGNPILVFA FLLLGLSLMG
LTFGPMGALL PELFPTEVRY TGASFSYNVS SILGASVAPY IAAWLQTNYG LGAVGLYLAA
MAGLTLIALL LTHETRHQSL
|
|---|
| |