| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3824 |
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| Symbol | |
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| ID | 6144469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3891929 |
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| End bp | 3892531 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641618650 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001745790 |
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| Protein GI | 170682867 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.201276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAATAG TCATGTTTGA CAGGCAGTCA ATATTTATTC ATGGAATGAA AATCAGTTTA
CAGCAGCGTA TTCCAGGAGT GAGTATTCAG GGGGCCGGTC AGGCAGACGA GTTATGGCAA
AAGCTGGAAA GTTACCCTGA AGCCTTAGTT ATGCTCGATG GCGATCAGGA TGGTGAGTTT
TGCTACTGGT TGCTGCAAAA AACCGTGGTG CAGTTTCCTG AGGTTAAGGT GTTAATTACG
GCGACGGATT GCAATAAACG GTGGTTACAG GAAGTTATCC ATTTTAATGT GCTGGCCATT
GTGCCTCGTG ATTCAACCGT TGAGACATTT GCGTTGGCGG TAAATAGTGC GGCGATGGGG
ATGATGTTTC TGCCGGGAGA CTGGCGAACG ACGCCGGAAA AGGACATTAA AGATCTCAAA
TCGTTAAGCG CCCGCCAGCG GGAGATTTTA ACCATGTTAG CGGCGGGCGA ATCAAATAAG
GAGATCGGCA GGGCGCTGAA TATCAGTACC GGAACGGTAA AAGCGCATCT GGAATCCCTG
TATCGCCGTC TGGAAGTGAA AAATCGCACC CAGGCGGCAA TGATGTTAAA TATCTCCTCC
TGA
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| Protein sequence | MQIVMFDRQS IFIHGMKISL QQRIPGVSIQ GAGQADELWQ KLESYPEALV MLDGDQDGEF
CYWLLQKTVV QFPEVKVLIT ATDCNKRWLQ EVIHFNVLAI VPRDSTVETF ALAVNSAAMG
MMFLPGDWRT TPEKDIKDLK SLSARQREIL TMLAAGESNK EIGRALNIST GTVKAHLESL
YRRLEVKNRT QAAMMLNISS
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