| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3823 |
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| Symbol | treF |
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| ID | 6143525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3890229 |
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| End bp | 3891878 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618649 |
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| Product | trehalase |
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| Protein accession | YP_001745789 |
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| Protein GI | 170680301 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1626] Neutral trehalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.121975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAATC AGAAAATTCA AAACCCTAAT CCAGACGAAC TGATGATCGA GGTCGATCTC
TGCTATGAGC TGGACCCGTA TGAATTAAAA CTGGATGAGA TGATCGAGGC AGAACCGGAA
CCCGAGATGA TTGAAGGGCT GCCCGCCTCT GATGCGCTGA CGCCTGCCGA TCGCTATCTC
GAACTGTTCG AGCATGTTCA GTCGGCGAAA ATTTTCCCCG ACAGTAAAAC CTTTCCCGAC
TGCGCACCTA AAATGGACCC GCTGGATATT TTAATCCGCT ACCGTAAAGT GCGCCGTCAT
CGTGATTTTG ACTTGCGCAA GTTTGTTGAA AACCACTTCT GGCTGCCGGA GGTCTACTCC
AGCGAGTATG TATCGGACCC GCAAAATTCC CTGAAAGAGC ATATCGACCA GCTGTGGCCG
GTGCTAACCC GCGAACCGCA GGATCACATT CCGTGGTCTT CTCTGCTGGC GCTGCCGCAG
TCATATATTG TCCCGGGCGG CCGTTTTAGC GAAACCTACT ATTGGGATTC CTATTTCACC
ATGCTGGGGC TGGCGGAAAG TGGTCGGGAA GATTTGCTGA AATGCATGGC CGATAACTTC
GCCTGGATGA TCGAAAACTA CGGTCACATC CCCAACGGCA ACCGCACCTA TTATTTGAGC
CGCTCGCAAC CACCGGTTTT TGCGCTGATG GTGGAGTTGT TTGAAGAAGA TGGTGTACGC
GGCGCGCGCC GCTATCTCGA CCACCTGAAA ATGGAATATG CCTTCTGGAT GGACGGTGCA
GAATCGTTGA TCCCTAATCA GGCCTATCGC CATGTTGTGC GGATGCCGGA CGGATCGCTG
CTCAACCGTT ACTGGGACGA TCGCGACACG CCGCGTGACG AATCCTGGCT TGAAGACGTT
GAAACCGCGA AACATTCTGG TCGCCCGCCT AACGAGGTGT ACCGCGATTT ACGTGCGGGG
GCGGCCTCCG GTTGGGATTA CTCTTCCCGT TGGCTGCGTG ATACTGGTCG TCTGGCGAGC
ATTCGTACCA CCCAGTTCAT CCCCATCGAT CTGAATGCCT TCCTGTTTAA ACTGGAGAGC
GCCATCGCCA ACATCTCGGC GCTGAAAGGC GAGAAAGAGA CAGAAGCACT GTTCCGCCAG
AAGGCCAGTG CCCGTCGCGA TGCGGTAAAC CGTTACCTCT GGGATGATGA AAACGGTATC
TACCGCGATT ACGACTGGCG ACGCGAGCAA CTGGCGCTGT TTTCCGCTGC CGCCATTGTG
CCGCTCTATG TCGGTATGGC GAACCATGAA CAGGCCGATC GTCTGGCAAA CGCCGTGCGC
AGCCGATTAC TGACACCTGG CGGGATTCTG GCAAGCGAGT ACGAAACCGG TGAACAGTGG
GATAAACCCA ACGGCTGGGC ACCGTTACAA TGGATGGCGA TTCAGGGATT TAAAATGTAT
GGCGATGACC TTCTGGGTGA TGAAATCGCG CGCAGCTGGC TGAAGACGGT GAATCAGTTC
TATCTGGAAC AGCACAAACT GATCGAGAAA TACCATATTG CCGATGGTGT CCCTCGCGAA
GGCGGCGGTG GCGAGTATCC GTTGCAGGAT GGGTTTGGCT GGACTAACGG TGTGGTGCGC
CGTTTAATTG GTTTGTACGG TGAACCATAA
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| Protein sequence | MLNQKIQNPN PDELMIEVDL CYELDPYELK LDEMIEAEPE PEMIEGLPAS DALTPADRYL
ELFEHVQSAK IFPDSKTFPD CAPKMDPLDI LIRYRKVRRH RDFDLRKFVE NHFWLPEVYS
SEYVSDPQNS LKEHIDQLWP VLTREPQDHI PWSSLLALPQ SYIVPGGRFS ETYYWDSYFT
MLGLAESGRE DLLKCMADNF AWMIENYGHI PNGNRTYYLS RSQPPVFALM VELFEEDGVR
GARRYLDHLK MEYAFWMDGA ESLIPNQAYR HVVRMPDGSL LNRYWDDRDT PRDESWLEDV
ETAKHSGRPP NEVYRDLRAG AASGWDYSSR WLRDTGRLAS IRTTQFIPID LNAFLFKLES
AIANISALKG EKETEALFRQ KASARRDAVN RYLWDDENGI YRDYDWRREQ LALFSAAAIV
PLYVGMANHE QADRLANAVR SRLLTPGGIL ASEYETGEQW DKPNGWAPLQ WMAIQGFKMY
GDDLLGDEIA RSWLKTVNQF YLEQHKLIEK YHIADGVPRE GGGGEYPLQD GFGWTNGVVR
RLIGLYGEP
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