| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3821 |
|---|
| Symbol | |
|---|
| ID | 6144046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3888427 |
|---|
| End bp | 3889824 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641618647 |
|---|
| Product | di-haem cytochrome c peroxidase family protein |
|---|
| Protein accession | YP_001745787 |
|---|
| Protein GI | 170680372 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.057161 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGG TCTCACGTAT TACCGCGATC GGCCTGGCTG GCGTCGCGAT TTGCTATTTA
GGGTTATCTG GTTATGTGTG GTACCACGAT AATAAACGCA GTAAGCAGGC CGATGTTCAG
GCATCTGCTG TCAGTGAAAA TAATCAGGTT TTAGGTTTTC TTCGCGAAAA AGGATGCGAC
TATTGCCATA CGCCTTCGGC AGAATTACCC GCCTATTATT ATATTCCTGG CGCGAAACAG
TTGATGGATT ACGACATTAA GCTTGGATAT AAATCTTTTA ACCTCGAGGC CGTGCGTGCG
GCTCTGCTGG CTGATAAACC CGTTTCGCAA AGCGATCTGA ATAAGATTGA ATGGGTAATG
CAGTATGAAA CCATGCCACC AACGCGTTAT ACCGCGCTAC ACTGGGCGGG TAAGGTGAGT
GATGAAGAGC GGGCGGAAAT ACTCGCCTGG ATTGCAAAAC AACGCGCAGA ATATTACGCC
AGTAATGATA CTGCTCCGGA GCATCGCAAT GAACCGGTGC AGCCCATCCC GCAAAAACTG
CCTACCGATG CGCAAAAAGT GGCGTTGGGC TTTGCGCTGT ATCACGATCC CCGTTTATCG
GCTGATAGCA CCATTTCATG CGCTCATTGC CATGCGTTGA ATGCGGGGGG CGTCGATGGC
AGAAAAACAT CGATTGGTGT TGGTGGCGCA GTTGGGCCGA TTAACGCGCC GACGGTATTT
AACTCAGTAT TTAACGTTGA GCAGTTCTGG GATGGTCGTG CGGCAACATT GCAGGATCAG
GCGGGTGGAC CGCCGTTGAA CCCGATTGAA ATGGCGTCGA AATCCTGGGA CGAAATTATT
GCTAAGCTGG AAAAAGATCC GCAGCTTAAA GCGCAGTTCC TCGAAGTCTA TCCGCAAGGT
TTCAGCGGTG AAAATATTAC TGATGCCATT GCTGAATTTG AAAAAACATT AATTACGCCG
GATTCCCCAT TTGATAAATG GTTGCGTGGA GATGAGAATG CGCTGACGGC ACAACAGAAA
AAAGGCTATC AATTATTTAA AGATAATAAA TGTGCAACTT GTCATGGTGG TATTATTCTC
GGCGGACGTT CCTTCGAACC GTTGGGGCTG AAAAAAGACT TTAACTTTGG TGAAATTACG
GCGGCGGATA TTGGTCGTAT GAATGTGACT AAAGAAGAGC GCGATAAATT GCGTCAGAAA
GTACCCGGTT TACGTAACGT TGCACTAACG GCACCGTACT TCCATCGCGG TGATGTGCCG
ACGCTGGACG GGGCGGTGAA ACTGATGTTG CGCTATCAGG TAGGCAAAGA GCTGCCGCAG
GAGGATGTGG ATGATATCGT AGCTTTCCTG CACAGTCTGA ACGGGGTTTA CACGCCGTAT
ATGCAGGATA AACAATAA
|
|---|
| Protein sequence | MKMVSRITAI GLAGVAICYL GLSGYVWYHD NKRSKQADVQ ASAVSENNQV LGFLREKGCD
YCHTPSAELP AYYYIPGAKQ LMDYDIKLGY KSFNLEAVRA ALLADKPVSQ SDLNKIEWVM
QYETMPPTRY TALHWAGKVS DEERAEILAW IAKQRAEYYA SNDTAPEHRN EPVQPIPQKL
PTDAQKVALG FALYHDPRLS ADSTISCAHC HALNAGGVDG RKTSIGVGGA VGPINAPTVF
NSVFNVEQFW DGRAATLQDQ AGGPPLNPIE MASKSWDEII AKLEKDPQLK AQFLEVYPQG
FSGENITDAI AEFEKTLITP DSPFDKWLRG DENALTAQQK KGYQLFKDNK CATCHGGIIL
GGRSFEPLGL KKDFNFGEIT AADIGRMNVT KEERDKLRQK VPGLRNVALT APYFHRGDVP
TLDGAVKLML RYQVGKELPQ EDVDDIVAFL HSLNGVYTPY MQDKQ
|
|---|
| |