| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3819 |
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| Symbol | gadX |
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| ID | 6144804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3885632 |
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| End bp | 3886456 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641618645 |
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| Product | DNA-binding transcriptional regulator GadX |
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| Protein accession | YP_001745785 |
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| Protein GI | 170681182 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0660589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCAC TACATGGTAA TTGTCTAATT GCGTACGCAA GACATAAATA TATTCTCACC
ATGGTTAATG GTGAATATCG CTATTTTAAT GGCGGTGATC TGGTTTTTGC GGATGCAAGC
CAAATTCAAG TGGATAAGTG TGTTGAGAAT TTCGTATTAG TTTCAAGAGA CACGCTTTCA
TTATTTCTCC CGATGCTCAA GGAGGAGGCA TTAAAACTTC ATGCACATAA AAAAGTTCCT
TCATTACTCG TTCATCACTG TACCAGAGAT ATTCCTGTTT TTCAGGAAGT TGCGCAACTA
TCGCAGAATA AGAATCTTCG CTATGCAGAA ATGCTACGTA AAAGGGCATT AATCTTTGCG
TTGTTATCTG TTTTTCTTGA GGATACGCAG TTTATACCGT TACTTCTGAA CGTGTTGCAA
CCGAATATGC GAACACGAGT TTGTACGGTC ATCAATAATA ATATCGCCCA TGAGTGGACA
TTAGCCCGAA TTGCTAGCGA ATTGTTGATG AGTCCAAGCC TGTTAAAGAA AAAATTGCGC
GAAGAAGGTA CGTCATATTC ACAGTTGCTT ACTGAGTGTA GGATGCAGCG TGCTTTACAA
CTTATTGTTA TATATGGGGT TTCAATTAAG CGAGTTGCAG TATCCTGTGG ATATCACAGC
GTGTCGTATT TCATTTACGT TTTTCGAAAT TATTATGGGA TGACGCCCAC AGAGTATCAG
GAGCGATCGG CGCAGGAATT ACCGAACTGT GGCCCGGCGG CAAGTATAGC TGCGCAAGGG
AATTTTTACG GCACTGACCG TTCTGCGGAA GGAATAAGAT TATAG
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| Protein sequence | MQPLHGNCLI AYARHKYILT MVNGEYRYFN GGDLVFADAS QIQVDKCVEN FVLVSRDTLS
LFLPMLKEEA LKLHAHKKVP SLLVHHCTRD IPVFQEVAQL SQNKNLRYAE MLRKRALIFA
LLSVFLEDTQ FIPLLLNVLQ PNMRTRVCTV INNNIAHEWT LARIASELLM SPSLLKKKLR
EEGTSYSQLL TECRMQRALQ LIVIYGVSIK RVAVSCGYHS VSYFIYVFRN YYGMTPTEYQ
ERSAQELPNC GPAASIAAQG NFYGTDRSAE GIRL
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