Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3807 |
Symbol | |
ID | 6146946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3873418 |
End bp | 3874041 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641618633 |
Product | hypothetical protein |
Protein accession | YP_001745773 |
Protein GI | 170684148 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0422433 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGT GGCTACTCTT TGGCGCAGGC GGAAAAGGTG TGGGTGCCAG AACGCTTGAA CTGGCGCTGG CGGAACAACG TCCGGTCGTT GCTGTCATTC GTCATGCTGA TGCCGCCACG AAACTGGCGC AACAAGGCGT ACAGGTTTTT ACAGGCGACG CCTGTGATGC CAGCGTAGTC GCGGCTGCTT GCCGCGCAGC TGGCCCGGAT GCGCTTATCA TCTCAACAAT GGGCGGAGCT CAGGATTATC TGGCGCACAG AACAGTGATT GACGAGGCCG AGAAGGCTGG CATCAGTCGC ATGATTCTGG TGACCTCTTT GGGATGCGGC GATAGCTGGC CGTTTTTATC AGAGCGGGCA AAGGCTGCGT TTGGTCAGGC GGTACGGGAA AAAACGCTGG CGGAAAGCTG GTTGCAAACC AGCCAGCTTG ATTATGCCAT TCTCCGCCCT GGCGGTCTGC TTGATGGGGC GGCAACGGGC AAAGCACAAC GGATACAAAA TCAGGAGTGT CATGGTTTTG TTCACCGTGC CGATGTCGCC GCACATATCC ATGAACTGGC AAATGCGCCA GCACTTAACC AGCAGGTCTA CAGTCTGATT GAACCGGACC TGAAACCGGC GTGA
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Protein sequence | MTPWLLFGAG GKGVGARTLE LALAEQRPVV AVIRHADAAT KLAQQGVQVF TGDACDASVV AAACRAAGPD ALIISTMGGA QDYLAHRTVI DEAEKAGISR MILVTSLGCG DSWPFLSERA KAAFGQAVRE KTLAESWLQT SQLDYAILRP GGLLDGAATG KAQRIQNQEC HGFVHRADVA AHIHELANAP ALNQQVYSLI EPDLKPA
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