Gene EcSMS35_3807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3807 
Symbol 
ID6146946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3873418 
End bp3874041 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content57% 
IMG OID641618633 
Producthypothetical protein 
Protein accessionYP_001745773 
Protein GI170684148 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0422433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGT GGCTACTCTT TGGCGCAGGC GGAAAAGGTG TGGGTGCCAG AACGCTTGAA 
CTGGCGCTGG CGGAACAACG TCCGGTCGTT GCTGTCATTC GTCATGCTGA TGCCGCCACG
AAACTGGCGC AACAAGGCGT ACAGGTTTTT ACAGGCGACG CCTGTGATGC CAGCGTAGTC
GCGGCTGCTT GCCGCGCAGC TGGCCCGGAT GCGCTTATCA TCTCAACAAT GGGCGGAGCT
CAGGATTATC TGGCGCACAG AACAGTGATT GACGAGGCCG AGAAGGCTGG CATCAGTCGC
ATGATTCTGG TGACCTCTTT GGGATGCGGC GATAGCTGGC CGTTTTTATC AGAGCGGGCA
AAGGCTGCGT TTGGTCAGGC GGTACGGGAA AAAACGCTGG CGGAAAGCTG GTTGCAAACC
AGCCAGCTTG ATTATGCCAT TCTCCGCCCT GGCGGTCTGC TTGATGGGGC GGCAACGGGC
AAAGCACAAC GGATACAAAA TCAGGAGTGT CATGGTTTTG TTCACCGTGC CGATGTCGCC
GCACATATCC ATGAACTGGC AAATGCGCCA GCACTTAACC AGCAGGTCTA CAGTCTGATT
GAACCGGACC TGAAACCGGC GTGA
 
Protein sequence
MTPWLLFGAG GKGVGARTLE LALAEQRPVV AVIRHADAAT KLAQQGVQVF TGDACDASVV 
AAACRAAGPD ALIISTMGGA QDYLAHRTVI DEAEKAGISR MILVTSLGCG DSWPFLSERA
KAAFGQAVRE KTLAESWLQT SQLDYAILRP GGLLDGAATG KAQRIQNQEC HGFVHRADVA
AHIHELANAP ALNQQVYSLI EPDLKPA