Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3800 |
Symbol | dctR |
ID | 6144395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3866306 |
End bp | 3866836 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641618626 |
Product | transcriptional regulator DctR |
Protein accession | YP_001745766 |
Protein GI | 170681778 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.202251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCTTA TAATTACCAG GGATACGATG TTCTTCACTG CGATGAAAAA CATTCTGAGT AAAGGTAATG TCGTTCATAT ACAGAACGAA GAAGAGATCG ACGTAATGTT GCATCAGCAT GCCTTCGTCA TTATTGATAC ATTAATGAAT AATGTATTTC ATTCTAATTT GCTCACTCAA ATTGAACGAT TAAAACCTGT CCATGTGATT ATTTTCTCTC CCTTTAATAT TAAACGCTGC CTGGGGAAAG TACCGGTGAC CTTTGTTCCG CGAACTATCA CCATCATCGA CTTTGTCGCA CTCATCAATG GCAGTTACTG CTCTGTGCCT GAAGCGGATG TGGCCCTTTC GCGCAAGCAG CATCAGGTTC TGAGCTGCAT TGCGAATCAA ATGACAACGG AAGATATTCT GGAGAAACTG AAAATATCGC TAAAAACGTT CTACTGCCAT AAACACAATA TCATGATGAT CCTCAATCTT AAGCGGATCA ATGAGTTGGT ACGCCATCAG CATATTGATT ATCTGGTGTG A
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Protein sequence | MFLIITRDTM FFTAMKNILS KGNVVHIQNE EEIDVMLHQH AFVIIDTLMN NVFHSNLLTQ IERLKPVHVI IFSPFNIKRC LGKVPVTFVP RTITIIDFVA LINGSYCSVP EADVALSRKQ HQVLSCIANQ MTTEDILEKL KISLKTFYCH KHNIMMILNL KRINELVRHQ HIDYLV
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