| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3794 |
|---|
| Symbol | arsB |
|---|
| ID | 6146139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3860362 |
|---|
| End bp | 3861651 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641618620 |
|---|
| Product | arsenical pump membrane protein |
|---|
| Protein accession | YP_001745760 |
|---|
| Protein GI | 170683643 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
|---|
| TIGRFAM ID | [TIGR00935] arsenical pump membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.146507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTGG CGGGCGCTAT CTTTGTCCTG ACCATCGTAT TGGTTATCTG GCAGCCGAAA
GGTTTAGGCA TCGGCTGGAG TGCGACACTG GGCGCCGTAC TGGCGTTAGT TACTGGCGTG
GTCCATCCGG GCGATATTCC GGTGGTGTGG AATATCGTCT GGAACGCGAC GGCGGCGTTT
ATAGCCGTCA TTATCATCAG CTTGCTGCTG GATGAGTCCG GCTTTTTTGA ATGGGCGGCG
CTGCACGTCT CACGCTGGGG CAATGGGCGC GGTCGCTTGC TGTTTACCTG GATTGTCCTG
CTCGGTGCTG CCGTTGCAGC TCTGTTTGCC AATGATGGCG CGGCGCTTAT TTTGACACCG
ATTGTCATCG CCATGCTGCT GGCTTTAGGG TTCAACAAAG GCACTACGCT GGCGTTTGTT
ATGGCGGCCG GATTCATTGC CGATACCGCC AGCCTGCCGC TTATTGTCTC TAACCTGGTG
AATATCGTTT CGGCAGATTT CTTTAGCCTC GACTTTCGCG AATACGCCTC GGTGATGGTG
CCGGTGGATA TCGCTGCAAT ACTGGCTACC CTGGTGATGT TGCATCTCTA TTTCCGCAAA
GATATTCCGC AGAACTACGA CATGGCGCTG CTAAAATCTC CCGCAGAAGC GGTTAAAGAT
CCTGCCACCT TCAAAACTGG CGGGGTTGTT TTACTGCTTC TGCTGGTGGG ATTTTTCGTC
CTGGAACCGC TCGGCATTCC GGTAAGCGCC ATTGCGGCAG TGGGCGCGCT GATATTATTT
GTCGTCGCTA AACGCGGTCA TGCGATTAAT ACGGGTAAGG TGCTGCGCGG TGCGCCCTGG
CAGATTGTCA TCTTCTCGCT CGGCATGTAT CTGGTGGTTT ATGGCCTGCG CAATGCCGGA
TTAACGGAAT ATCTTTCTGG CGTACTCAAC GTGCTGGCGG ATAACGGCCT GTGGGCGGCG
ACGCTCGGCA CCGGATTCCT CACCGCCTTC CTCTCTTCTA TTATGAACAA TATGCCGACG
GTACTGGTTG GCGCGTTGTC CATTGATGGC AGCACGGCAT CTGGTGTCAT CAAAGAAGCG
ATGGTTTATG CCAACGTAAT TGGCTGCGAT TTGGGGCCGA AAATTACACC GATTGGTAGC
CTGGCAACGC TGCTCTGGCT GCACGTACTT TCGCAGAAGA ATATGACTAT CAGCTGGGGA
TATTACTTCC GTACAGGGAT TATCATGACC CTGCCGGTGC TGTTTGTGAC GCTCGCCGCG
CTGGCGCTTC GTCTCTCTTT CACTTTGTAA
|
|---|
| Protein sequence | MLLAGAIFVL TIVLVIWQPK GLGIGWSATL GAVLALVTGV VHPGDIPVVW NIVWNATAAF
IAVIIISLLL DESGFFEWAA LHVSRWGNGR GRLLFTWIVL LGAAVAALFA NDGAALILTP
IVIAMLLALG FNKGTTLAFV MAAGFIADTA SLPLIVSNLV NIVSADFFSL DFREYASVMV
PVDIAAILAT LVMLHLYFRK DIPQNYDMAL LKSPAEAVKD PATFKTGGVV LLLLLVGFFV
LEPLGIPVSA IAAVGALILF VVAKRGHAIN TGKVLRGAPW QIVIFSLGMY LVVYGLRNAG
LTEYLSGVLN VLADNGLWAA TLGTGFLTAF LSSIMNNMPT VLVGALSIDG STASGVIKEA
MVYANVIGCD LGPKITPIGS LATLLWLHVL SQKNMTISWG YYFRTGIIMT LPVLFVTLAA
LALRLSFTL
|
|---|
| |