| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3788 |
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| Symbol | yhiR |
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| ID | 6143571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3856810 |
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| End bp | 3857652 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618614 |
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| Product | DNA utilization protein YhiR |
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| Protein accession | YP_001745754 |
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| Protein GI | 170679705 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2961] Protein involved in catabolism of external DNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.489053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGTT ATCGCCACAG CTTTCACGCT GGCAACCACG CCGACGTCCT TAAACATACC
GTTCAGAGCC TGATCATCGA GTCGCTGAAA GAGAAAGATA AACCGTTTCT CTATCTCGAC
ACCCACGCAG GGGCCGGGCG TTATCAGTTA GGCAGCGAAC ATGCCGAGCG TACCGGCGAA
TATCTCGAAG GTATCGCCCG TATCTGGCAG CAGGACGATT TGCCTGCGGA GCTGGAGGCG
TACATCAATG TGGTAAAACA CTTCAACCGT AGCGGTCAGT TGCGTTATTA CCCCGGTTCG
CCGTTGATTG CTCGCCAGCT ACTGCGTGAA CAGGACAGCC TGCAACTGAC CGAACTGCAC
CCGAGCGATT ACCCGTTGCT GCGTTCTGAA TTTCAGAAAG ACAGCCGTGC GCGCGTCGAA
AAAGCCGATG GTTTCCAGCA GCTTAAGGCC AAACTGCCGC CGGTTTCCCG CCGTGGTTTA
ATCCTTATCG ACCCGCCGTA TGAAATGAAA ACCGACTATC AGGCGGTGGT CAGCGGGATA
GCAGAAGGTT ACAAACGTTT CGCCACTGGC ACTTACGCAT TGTGGTATCC AGTGGTGCTG
CGCCAGCAAA TTAAGCGCAT GATCCACGAC CTGGAAGCGA CCGGCATTCG CAAAATTCTG
CAAATTGAAC TGGCGGTGCT GCCAGACAGC GATCGCCGTG GCATGACCGC TTCCGGCATG
ATTGTGATTA ACCCGCCGTG GAAGCTGGAA CAGCAGATGA ATAACGTGCT GCCGTGGCTG
CACAGCAAAC TGGTTCCAGC AGGCACCGGG CACGCCACCG TAAGCTGGAT CGTGCCAGAG
TAA
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| Protein sequence | MLSYRHSFHA GNHADVLKHT VQSLIIESLK EKDKPFLYLD THAGAGRYQL GSEHAERTGE
YLEGIARIWQ QDDLPAELEA YINVVKHFNR SGQLRYYPGS PLIARQLLRE QDSLQLTELH
PSDYPLLRSE FQKDSRARVE KADGFQQLKA KLPPVSRRGL ILIDPPYEMK TDYQAVVSGI
AEGYKRFATG TYALWYPVVL RQQIKRMIHD LEATGIRKIL QIELAVLPDS DRRGMTASGM
IVINPPWKLE QQMNNVLPWL HSKLVPAGTG HATVSWIVPE
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