| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3787 |
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| Symbol | prlC |
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| ID | 6142652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3854565 |
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| End bp | 3856607 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618613 |
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| Product | oligopeptidase A |
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| Protein accession | YP_001745753 |
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| Protein GI | 170684269 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.894892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC CGTTACTGAC TCCCTTTGAA TTGCCTCCGT TTTCTAAAAT TCTCCCGGAA
CATGTCGTTC CAGCCGTGAC TAAGGCGCTG AACGACTGCC GCGAAAATGT GGAGCGCGTA
GTAGCGCAAG GGGCACCGTA CACCTGGGAA AATCTCTGCC AGCCGTTGGC GGAAGTGGAC
GATGTGCTGG GGCGTATCTT CTCCCCGGTC AGCCACCTGA ACTCGGTGAA AAATAGCCCG
GAACTGCGTG AAGCGTACGA ACAAACCCTG CCGCTGCTGT CAGAATACAG CACCTGGGTA
GGGCAACATG AAGGGCTGTA TAAGGCATAT CGCGACCTGC GCGATGGCGA TCATTACGCC
ACGCTGAACA CGGCGCAGAA AAAAGCGGTT GATAACGCAC TGCGCGACTT CGAACTCTCT
GGCATCGGTC TGCCGAAAGA GAAACAGCAG CGTTACGGCG AAATTGCTAC CCGTCTTTCT
GAACTGGGCA ACCAGTACAG CAACAACGTC CTCGATGCGA CGATGGGCTG GACCAAACTC
GTTACCGACG AAGCGGAGCT GGCGGGGATG CCAGAAAGCG CGCTGGCTGC GGCAAAAGCC
CAGGCCGAAG CGAAAGAGCT GGAAGGTTAT TTGCTGACGC TGGATATCCC AAGCTACTTG
CCGGTAATGA CCTACTGCGA CAACCAGGCT CTGCGTGAAG AGATGTATCG TGCTTACAGC
ACCCGCGCTT CCGATCAAGG CCCGAACGCC GGTAAGTGGG ACAACAGCAA GGTGATGGAA
GAGATCCTCG CGCTGCGTCA CGAACTGGCG CAACTGCTGG GCTTTGAAAA CTATGCCTTT
AAATCCCTTG CTACTAAAAT GGCAGAAAAC CCGCAGCAGG TGCTGGATTT CTTAACCGAT
CTGGCAAAAC GCGCGCGTCC ACAAGGCGAA AAAGAGCTGG CGCAACTGCG TGCCTTCGCC
AAAGCCGAAT TTGGCGTCGA TGAGTTGCAG CCGTGGGATA TCGCTTACTA CAGCGAAAAA
CAGAAACAGC ACCTCTACAG CATCAGCGAT GAACAACTGC GTCCGTACTT CCCGGAAAAC
AAAGCGGTTA ACGGCCTGTT TGAAGTGGTG AAACGTATTT ACGGCATCAC CGCTAAAGAG
CGTAAAGATG TTGATGTCTG GCATCCGGAT GTACGTTTCT TCGAACTGTA TGACGAGAAC
AACGAACTGC GCGGCAGCTT CTACCTCGAC CTGTATGCCC GTGAAAACAA ACGCGGCGGG
GCGTGGATGG ATGACTGCGT AGGCCAGATG CGTAAAGCCG ACGGTTCGCT GCAAAAACCG
GTCGCGTATC TGACCTGCAA CTTCAACCGC CCGGTAAATG GTAAACCGGC GCTGTTTACC
CATGACGAAG TGATCACCCT GTTCCACGAG TTCGGTCACG GCCTGCATCA TATGCTGACC
CGCATTGAAA CCGCTGGAGT GTCTGGTATC AGCGGGGTGC CGTGGGATGC GGTCGAACTG
CCGAGCCAGT TTATGGAAAA CTGGTGCTGG GAGCCGGAGG CGCTGGCGTT TATCTCCGGT
CACTATGAAA CCGGCGAACC GCTGCCGAAA GAGTTGCTGG ATAAAATGCT GGCGGCGAAG
AACTACCAGG CGGCGCTGTT TATTCTGCGC CAGCTGGAGT TCGGTCTGTT CGATTTCCGC
CTCCATGCCG AGTTCCGCCC GGATCAGGGA GCGAAAATCC TCGAAACTCT GGCAGAAATC
AAGAAACTGG TTGCCGTAGT ACCGTCTCCA TCCTGGGGCC GTTTCCCGCA CGCTTTCAGC
CATATTTTCG CCGGTGGTTA TGCCGCAGGT TACTACAGCT ACCTGTGGGC CGACGTGCTG
GCGGCAGATG CCTTCTCGCG CTTTGAGGAA GAGGGCATTT TCAACCGTGA AACCGGACAG
TCGTTCCTCG ACAACATTCT GAGCCGTGGC GGTTCAGAAG AGCCGATGGA TCTGTTCAAA
CGCTTCCGTG GTCGTGAACC GCAGCTGGAT GCGATGCTGG AGCATTACGG CATTAAGGGC
TGA
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| Protein sequence | MTNPLLTPFE LPPFSKILPE HVVPAVTKAL NDCRENVERV VAQGAPYTWE NLCQPLAEVD
DVLGRIFSPV SHLNSVKNSP ELREAYEQTL PLLSEYSTWV GQHEGLYKAY RDLRDGDHYA
TLNTAQKKAV DNALRDFELS GIGLPKEKQQ RYGEIATRLS ELGNQYSNNV LDATMGWTKL
VTDEAELAGM PESALAAAKA QAEAKELEGY LLTLDIPSYL PVMTYCDNQA LREEMYRAYS
TRASDQGPNA GKWDNSKVME EILALRHELA QLLGFENYAF KSLATKMAEN PQQVLDFLTD
LAKRARPQGE KELAQLRAFA KAEFGVDELQ PWDIAYYSEK QKQHLYSISD EQLRPYFPEN
KAVNGLFEVV KRIYGITAKE RKDVDVWHPD VRFFELYDEN NELRGSFYLD LYARENKRGG
AWMDDCVGQM RKADGSLQKP VAYLTCNFNR PVNGKPALFT HDEVITLFHE FGHGLHHMLT
RIETAGVSGI SGVPWDAVEL PSQFMENWCW EPEALAFISG HYETGEPLPK ELLDKMLAAK
NYQAALFILR QLEFGLFDFR LHAEFRPDQG AKILETLAEI KKLVAVVPSP SWGRFPHAFS
HIFAGGYAAG YYSYLWADVL AADAFSRFEE EGIFNRETGQ SFLDNILSRG GSEEPMDLFK
RFRGREPQLD AMLEHYGIKG
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