| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3785 |
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| Symbol | |
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| ID | 6146935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3852287 |
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| End bp | 3853756 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618611 |
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| Product | inner membrane transporter YhiP |
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| Protein accession | YP_001745751 |
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| Protein GI | 170682598 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAA CAACACCCAT GGGGATGCTG CAGCAACCTC GCCCATTTTT CATGATCTTT
TTTGTCGAGT TATGGGAGCG ATTCGGCTAC TACGGCGTGC AGGGCGTACT GGCTGTTTTC
TTCGTTAAGC AGCTTGGATT CTCGCAAGAA CAGGCTTTTG TCACTTTTGG TGCTTTTGCT
GCGCTGGTCT ATGGCCTCAT TTCCATTGGC GGCTATGTCG GCGACCACCT GCTGGGGACC
AAACGCACCA TTGTTCTCGG AGCACTTGTG CTGGCGATTG GCTACTTCAT GACCGGCCTG
TCGCTACTTA AGCCTGACCT GATTTTCATC GCCCTGGGGA CTATCGCTGT CGGTAACGGC
CTGTTTAAAG CTAACCCAGC CAGCTTGCTT TCGAAGTGCT ATCCGCCGAA AGATCCGCGG
CTTGATGGCG CATTTACCCT GTTCTATATG TCGATCAACA TCGGCTCGTT GATAGCGTTA
TCGCTGGCCC CTGTGATCGC TGATAGATTC GGCTATTCAG TCACCTACAA CCTGTGCGGT
GCGGGATTAA TTATCGCGCT ATTGGTTTAC ATCGCCTGTC GCGGAATGGT GAAAGATATT
GGTTCTGAAC CCGACTTCTG CCCGATGAGC TTCAGTAAAC TGTTGTACGT GTTACTTGGC
AGCGTGGTGA TGATCTTCGT CTGTGCATGG CTGATGCACA ACGTAGAAGT CGCCAATCTG
GTGCTGATTG TTCTCTCCAT CGTCGTCACC ATCATTTTCT TTCGTCAGGC ATTCAAGCTG
GATAAAACTG GGCGCAATAA AATGTTTGTC GCCTTTGTCC TGATGCTCGA AGCGGTGGTG
TTTTACATTC TCTACGCCCA GATGCCAACG TCGCTGAACT TCTTTGCCAT CAACAACGTG
CATCATGAAA TTCTCGGCTT TTCCATCAAC CCGGTCAGCT TCCAGGCGCT TAACCCGTTC
TGGGTGGTAC TCGCCAGCCC AATACTGGCA GGCATTTACA CGCATCTGGG TAACAAAGGC
AAAGACCTCT CGATGCCGAT GAAATTTACT CTCGGAATGT TTATGTGCTC GCTGGGCTTT
TTGACGGCTG CAGCGGCTGG AATGTGGTTT GCGGATGCCC AGGGGCTGAC ATCGCCATGG
TTTATCGTGC TGGTGTACTT ATTCCAGAGC CTGGGTGAAC TGTTTATTAG CGCCCTGGGC
CTGGCGATGA TTGCTGCCCT GGTGCCGCAG CATTTGATGG GCTTTATTCT CGGGATGTGG
TTCCTGACGC AGGCTGCCGC GTTCTTGCTG GGCGGCTATG TGGCAACATT TACCGCAGTA
CCAGACAACA TTACCGATCC GCTTGAGACG TTGCCCGTCT ATACCAACGT GTTTGGTAAG
ATTGGCCTGG TTACGCTGGG CGTTGCGGTG GTGATGCTGC TGATGGTGCC GTGGCTGAAA
CGCATGATTG CGACACCCGA AAGCCATTAA
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| Protein sequence | MNTTTPMGML QQPRPFFMIF FVELWERFGY YGVQGVLAVF FVKQLGFSQE QAFVTFGAFA
ALVYGLISIG GYVGDHLLGT KRTIVLGALV LAIGYFMTGL SLLKPDLIFI ALGTIAVGNG
LFKANPASLL SKCYPPKDPR LDGAFTLFYM SINIGSLIAL SLAPVIADRF GYSVTYNLCG
AGLIIALLVY IACRGMVKDI GSEPDFCPMS FSKLLYVLLG SVVMIFVCAW LMHNVEVANL
VLIVLSIVVT IIFFRQAFKL DKTGRNKMFV AFVLMLEAVV FYILYAQMPT SLNFFAINNV
HHEILGFSIN PVSFQALNPF WVVLASPILA GIYTHLGNKG KDLSMPMKFT LGMFMCSLGF
LTAAAAGMWF ADAQGLTSPW FIVLVYLFQS LGELFISALG LAMIAALVPQ HLMGFILGMW
FLTQAAAFLL GGYVATFTAV PDNITDPLET LPVYTNVFGK IGLVTLGVAV VMLLMVPWLK
RMIATPESH
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