Gene EcSMS35_3781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3781 
Symbol 
ID6146209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3847807 
End bp3849009 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content55% 
IMG OID641618607 
Productpyridine nucleotide-disulfide oxidoreductase family protein 
Protein accessionYP_001745747 
Protein GI170683730 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAGGT TTGATGCCAT TATTATAGGC GCTGGTGCGG CAGGTATGTT CTGTTCTGCG 
CTGGCAGGTC AGGCAGGACG CCGGGTTCTG CTGATCGATA ATGGTAAAAA ACCAGGGCGC
AAAATCCTCA TGTCTGGCGG TGGGCGCTGC AACTTTACCA ACCTTTATGT CGAACCGGGC
GCTTATCTGA GCCAGAATCC GCATTTTTGT AAGTCTGCAC TCGCGCGTTT TACCCAGTGG
GATTTCATTG ATCTGGTCAA TAAACACGGC ATCACCTGGC ACGAGAAAAC GTTAGGGCAA
CTCTTCTGCG ATGACTCCGC GCAGCAGATT GTCGACATGC TGGTGGATGA GTGCGAGAAG
GGCAATGTGA CCTTCAGATT GCGTAGCGAA GTGCTGAGTG TGGCGAAGGA TGAAACAGGC
TTCACGCTTG AACTGAACGG CATGACTGTC GGTTGCGAAA AGCTGGTCAT CGCGACCGGT
GGGCTGTCAA TGCCGGGGCT GGGCGCATCG CCGTTTGGTT ATAAGATTGC CGAACAATTT
GGCCTCAACG TGCTGCCGAC CCGCGCGGGC CTGGTGCCAT TCACTCTGCA TAAACCGTTG
CTCGAAGAGT TACAGGTGCT GGCGGGCGTG GCGGTGCCTT CCGTGATTAC CGCTGAAAAC
GGCACCGTTT TCCGTGAGAA CTTACTCTTC ACCCACCGCG GCTTATCTGG ACCGGCGGTG
TTGCAAATTT CCAGCTACTG GCAACCGGGT GAATTTGTCA GTATCAATCT GCTACCGGAT
GTGGACCTCG AAACCTTCCT GAATGAGCAG CGTAATGCAC ATCCGAATCA GAGCCTGAAA
AACACACTGG CGGTTCATCT ACCGAAGCGG TTGGTTGAAC GTTTACAGCA ACTCGGGCAA
ATCCCGGATG TTTCGCTAAA ACAGCTCAAC GTGCGTGACC AACAGGCACT GATTAGCACA
TTGACCGACT GGCGCGTACA ACCCAACGGC ACTGAAGGCT ATCGTACTGC TGAAGTGACG
CTCGGCGGCG TGGACACCAA CGAACTCTCT TCACGGACGA TGGAAGCGCG CAAAGTGCCA
GGGCTGTACT TCATCGGCGA AGTGATGGAC GTCACCGGTT GGCTGGGGGG CTATAATTTC
CAGTGGGCGT GGTCGAGTGC GTGGGCTTGT GCGCAGGATT TGATTGCAGC GAAGTCGTCC
TGA
 
Protein sequence
MERFDAIIIG AGAAGMFCSA LAGQAGRRVL LIDNGKKPGR KILMSGGGRC NFTNLYVEPG 
AYLSQNPHFC KSALARFTQW DFIDLVNKHG ITWHEKTLGQ LFCDDSAQQI VDMLVDECEK
GNVTFRLRSE VLSVAKDETG FTLELNGMTV GCEKLVIATG GLSMPGLGAS PFGYKIAEQF
GLNVLPTRAG LVPFTLHKPL LEELQVLAGV AVPSVITAEN GTVFRENLLF THRGLSGPAV
LQISSYWQPG EFVSINLLPD VDLETFLNEQ RNAHPNQSLK NTLAVHLPKR LVERLQQLGQ
IPDVSLKQLN VRDQQALIST LTDWRVQPNG TEGYRTAEVT LGGVDTNELS SRTMEARKVP
GLYFIGEVMD VTGWLGGYNF QWAWSSAWAC AQDLIAAKSS