Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3764 |
Symbol | nikE |
ID | 6142647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3829524 |
End bp | 3830330 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641618590 |
Product | nickel transporter ATP-binding protein NikE |
Protein accession | YP_001745730 |
Protein GI | 170680252 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR02769] nickel import ATP-binding protein NikE |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTAC TTAACGTCTC CGACCTTTCC CATCACTATG CGCACGGTGG ATTTAGCGGA AAACATCAAC ACCAGGCGGT GCTGAATAAC GTTTCCCTGA CCCTGAAAAG CGGCGAAACC GTCGCTCTGC TGGGGCGCAG CGGCTGCGGA AAAAGCACTC TCGCGCGGCT GCTGGTAGGC TTAGAGTCTC CCTCACAAGG GAATATTAGC TGGCGCGGCG AACCGTTGGC AAAGCTCAAT CGCGCCCAGC GTAAAGCGTT CCGCCGCGAT ATTCAGATGG TATTTCAGGA CTCCATCAGC GCCGTGAATC CGCGCAAAAC CGTGCGCGAG ATCCTGCGAG AACCGATGCG CCACCTGCTA TCGCTGAAAA AAGCCGAACA ACTGGCGCGC GCCAGCGAAA TGCTGAAGGC GGTCGATCTC GATGACAGCG TTCTAGACAA ACGCCCACCG CAGTTAAGCG GCGGTCAGCT CCAGCGCGTC TGCCTGGCTC GCGCGCTGGC GGTCGAACCG AAACTACTGA TTCTGGATGA AGCCGTTTCT AACCTTGATC TCGTGTTACA GGCGGGCGTC ATTCGCCTGC TGAAAAAGCT ACAACAACAG TTTGGCACTG CCTGCCTGTT CATCACTCAT GACTTACGCC TGGTGGAACG CTTTTGCCAG CGAGTGATGG TGATGGACAA CGGACAAATC GTCGAAACCC AGGCGGTGGG AGATAAATTA ACCTTTTCCT CTGACGCCGG ACGTGTGCTA CAAAACGCGG TATTACCCGC ATTCCCCGTG CGCCGTCGCA CCACAGAAAA GGTTTAA
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Protein sequence | MTLLNVSDLS HHYAHGGFSG KHQHQAVLNN VSLTLKSGET VALLGRSGCG KSTLARLLVG LESPSQGNIS WRGEPLAKLN RAQRKAFRRD IQMVFQDSIS AVNPRKTVRE ILREPMRHLL SLKKAEQLAR ASEMLKAVDL DDSVLDKRPP QLSGGQLQRV CLARALAVEP KLLILDEAVS NLDLVLQAGV IRLLKKLQQQ FGTACLFITH DLRLVERFCQ RVMVMDNGQI VETQAVGDKL TFSSDAGRVL QNAVLPAFPV RRRTTEKV
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