| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3762 |
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| Symbol | nikC |
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| ID | 6146685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3827930 |
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| End bp | 3828763 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641618588 |
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| Product | nickel transporter permease NikC |
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| Protein accession | YP_001745728 |
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| Protein GI | 170683465 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02790] nickel ABC transporter, permease subunit NikC |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTTTT TCCTCTCCTC CCGCTGGTCG GTTCGCCTGG CGCTGATCAT TATCGCCCTG
CTGGCACTGA TTGCGCTCAC CAGCCAGTGG TGGCTGCCGT ATGACCCACA GGCGATTGAT
CTGCCGTCGC GCCTGCTTTC ACCGGATGCG CAGCACTGGC TGGGTACCGA TCATTTAGGG
CGCGATATTT TCTCGCGGCT GATGGCGGCG ACCCGCGTGT CGCTCGGCTC GGTAATGGCC
TGCCTGCTGC TGGTGCTGAC ATTAGGGCTG GTTATTGGCG GCAGCGCCGG ACTGATTGGC
GGGCGCGTTG ATCAGGCCAC CATGCGCGTC GCGGATATGT TTATGACCTT CCCGACCTCG
ATTCTGTCGT TCTTTATGGT TGGCGTGCTC GGCACCGGGC TGACCAACGT AATTATCGCC
ATCGCCCTGT CGCACTGGGC GTGGTATGCA CGCATGGTGC GCAGCCTGGT GATTTCGCTA
CGCCAGCGCG AGTTTGTACT GGCATCACGG CTTTCTGGCG CGGGCCATGT GCGAGTGTTT
GTAGATCATC TGGCAGGTGC GGTGATCCCT TCGCTGCTGG TGCTGGCAAC GCTGGATATC
GGCCATATGA TGCTACACGT CGCGGGGATG TCCTTCCTCG GCCTCGGCGT GACCGCGCCT
ACCGCCGAAT GGGGCGTGAT GATTAACGAC GCGCGCCAGT ATATCTGGAC CCAGCCGCTG
CAAATGTTCT GGCCGGGGCT GGCGCTGTTT ATCAGCGTGA TGGCCTTTAA CCTGGTGGGT
GACGCACTGC GCGATCATCT GGACCCTCAT CTGGTGACGG AGCACGCACA CTAA
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| Protein sequence | MNFFLSSRWS VRLALIIIAL LALIALTSQW WLPYDPQAID LPSRLLSPDA QHWLGTDHLG
RDIFSRLMAA TRVSLGSVMA CLLLVLTLGL VIGGSAGLIG GRVDQATMRV ADMFMTFPTS
ILSFFMVGVL GTGLTNVIIA IALSHWAWYA RMVRSLVISL RQREFVLASR LSGAGHVRVF
VDHLAGAVIP SLLVLATLDI GHMMLHVAGM SFLGLGVTAP TAEWGVMIND ARQYIWTQPL
QMFWPGLALF ISVMAFNLVG DALRDHLDPH LVTEHAH
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