Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3761 |
Symbol | nikB |
ID | 6143337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3826989 |
End bp | 3827933 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641618587 |
Product | nickel transporter permease NikB |
Protein accession | YP_001745727 |
Protein GI | 170682486 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGTT ATGTATTACG CCGCTTTCTG CTGCTGATCC CGATGGTGCT CGCCGCCTCG GTGATCATTT TTCTGATGCT GCGCCTCGGC ACCGGCGACC CGGCGCTCGA TTATCTGCGT CTGTCTAACC TGCCGCCGAC GCCGGAAATG CTGGCTTCTA CCCGCACCAT GCTGGGGCTG GATCAGCCGT TGTACGTGCA GTACGGAACC TGGTTGTGGA AAGCGCTGCA TCTTGACTTT GGTATCTCAT TCGCCAGCCA ACGCCCGGTG CTGGACGATA TGCTGACCTT CCTGCCCGCC ACGCTGGAGC TGGCGGGTGC GGCGCTGGTA TTAATTCTGC TCACTTCCGT GCCGCTCGGC ATCTGGGCGG CGCGCCATCG CGACCGCCTG CCGGATTTCG CCGTGCGTTT TATCGCGTTT CTTGGCGTGT CGATGCCTAA CTTCTGGTTG GCGTTTTTAC TGGTGATGGC ATTTTCAGTG TATCTGCAAT GGCTGCCCGC GATGGGTTAC GGCGGCTGGC AGCACATCAT TTTGCCTGCG GTTTCCATCG CTTTTATGTC GCTGGCGATT AACGCGCGTC TGCTGCGCGC CAGTATGCTG GACGTCGCCG GTCAGCGTCA TGTGACCTGG GCGCGACTGC GCGGCCTGAA CGACAAACAG ACCGAACGCC GCCACATCCT GCGCAATGCC TCGCTGCCGA TGATCACCGC CGTGGGGATG CACATTGGCG AACTGATTGG CGGGACGATG ATTATCGAAA ACATCTTTGC CTGGCCGGGC GTCGGGCGCT ATGCGGTGTC GGCGATTTTC AACCGTGACT ATCCGGTGAT CCAGTGCTTT ACGCTGATGA TGGTGGTGGT TTTTGTGGTC TGTAATTTGA TTGTCGATTT GCTCAACGCC GCGCTGGACC CACGTATTCG TCGTCATGAA GGAGCCCACG CGTGA
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Protein sequence | MLRYVLRRFL LLIPMVLAAS VIIFLMLRLG TGDPALDYLR LSNLPPTPEM LASTRTMLGL DQPLYVQYGT WLWKALHLDF GISFASQRPV LDDMLTFLPA TLELAGAALV LILLTSVPLG IWAARHRDRL PDFAVRFIAF LGVSMPNFWL AFLLVMAFSV YLQWLPAMGY GGWQHIILPA VSIAFMSLAI NARLLRASML DVAGQRHVTW ARLRGLNDKQ TERRHILRNA SLPMITAVGM HIGELIGGTM IIENIFAWPG VGRYAVSAIF NRDYPVIQCF TLMMVVVFVV CNLIVDLLNA ALDPRIRRHE GAHA
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