Gene EcSMS35_3735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3735 
SymbollivF 
ID6144344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3803972 
End bp3804685 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content57% 
IMG OID641618562 
Productleucine/isoleucine/valine transporter ATP-binding subunit 
Protein accessionYP_001745702 
Protein GI170683525 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG TCATGTTGTC CTTTGACAAA GTCAGCGCCC ACTACGGCAA AATCCAGGCG 
CTGCATGAGG TGAGCCTGCA TATCAATCAG GGCGAGATTG TCACCCTCAT TGGCGCGAAC
GGGGCGGGGA AAACCACCTT GCTCGGCACG TTATGCGGCG ATCCGCGCGC CACCAGTGGG
CGAATTGTGT TTGATGATAA AGACATTACC GACTGGCAGA CAGCGAAAAT CATGCGCGAA
GCGGTGGCGA TTGTTCCGGA AGGGCGTCGT GTTTTCTCGC GGATGACGGT GGAAGAGAAC
CTGGCAATGG GCGGCTTTTT TGCCGAACGC GACCAGTTCC AGGAACGCAT AAAGTGGGTG
TATGAACTGT TTCCGCGTCT CCATGAACGC CGTGTTCAGC GGGCGGGCAC CATGTCCGGC
GGTGAGCAGC AGATGCTGGC GATTGGGCGC GCGCTGATGA GCAACCCGCG TTTGTTGTTG
CTTGATGAGC CATCGCTCGG GCTGGCACCG ATTATCATCC AGCAAATTTT CGACACCATC
GAACAACTGC GCGAGCAGGG GATGACCATC TTCCTCGTCG AGCAGAACGC CAACCAGGCG
CTGAAGCTCG CTGATCGCGG CTACGTGCTG GAAAACGGTC ATGTGGTGCT CTCCGATACT
GGTGATGCAC TACTGGCGAA TGAAGCGGTG AGAAGTGCGT ATTTAGGCGG GTAA
 
Protein sequence
MEKVMLSFDK VSAHYGKIQA LHEVSLHINQ GEIVTLIGAN GAGKTTLLGT LCGDPRATSG 
RIVFDDKDIT DWQTAKIMRE AVAIVPEGRR VFSRMTVEEN LAMGGFFAER DQFQERIKWV
YELFPRLHER RVQRAGTMSG GEQQMLAIGR ALMSNPRLLL LDEPSLGLAP IIIQQIFDTI
EQLREQGMTI FLVEQNANQA LKLADRGYVL ENGHVVLSDT GDALLANEAV RSAYLGG