Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3730 |
Symbol | |
ID | 6147144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3799604 |
End bp | 3800449 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641618556 |
Product | glycerol-3-phosphate transporter membrane protein |
Protein accession | YP_001745696 |
Protein GI | 170682666 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGAGA ACCGTCCGTG GCTGACAATA TTCAGCCATA CCATGCTGAT CCTCGGGATC GCGGTGATCC TCTTCCCGCT GTACGTGGCG TTTGTCGCGG CGACACTGGA TAAACAAGAA GTCTATGCCG CGCCGATGAC GCTAATCCCC GGCACACATC TGCTGGAAAA CATCCACAAC ATCTGGGTAA ACGGGGTAGG CACGAATAGT GCGCCGTTCT GGCGGATGTT GCTTAACAGC TTCGTGATGG CGTTCAGCAT TACGCTCGGC AAAATTACCG TCTCGATGCT CTCGGCATTT GCCATTGTCT GGTTTCGTTT TCCGCTACGT AACCTCTTCT TCTGGATGAT TTTTATCACC CTGATGCTGC CGGTTGAAGT GCGTATCTTC CCGACGGTGG AAGTCATCGC TAACCTGAAA ATGCTCGACA GCTACGCAGG TTTAACGCTG CCGCTGATGG CCTCGGCGAC CGCGACCTTC CTGTTCCGCC AGTTCTTTAT GACGCTGCCG GATGAGCTGG TGGAAGCGGC GCGGATCGAC GGTGCGTCAC CAATGCGTTT CTTTTGCGAC ATCGTTTTTC CGCTGTCCAA AACTAATCTG GCGGCGCTGT TTGTGATCAC CTTTATTTAC GGCTGGAACC AGTATTTGTG GCCGTTGTTG ATTATTACCG ATGTGGATCT CGGCACCACC GTAGCAGGGA TTAAAGGGAT GATCGCCACA GGCGAAGGCA CCACGGAATG GAACTCGGTG ATGGCGGCGA TGTTGTTAAC CCTGATCCCA CCAGTAGTGA TTGTTTTAGT GATGCAGCGT GCCTTCGTGC GCGGCCTGGT CGATAGTGAG AAATAA
|
Protein sequence | MIENRPWLTI FSHTMLILGI AVILFPLYVA FVAATLDKQE VYAAPMTLIP GTHLLENIHN IWVNGVGTNS APFWRMLLNS FVMAFSITLG KITVSMLSAF AIVWFRFPLR NLFFWMIFIT LMLPVEVRIF PTVEVIANLK MLDSYAGLTL PLMASATATF LFRQFFMTLP DELVEAARID GASPMRFFCD IVFPLSKTNL AALFVITFIY GWNQYLWPLL IITDVDLGTT VAGIKGMIAT GEGTTEWNSV MAAMLLTLIP PVVIVLVMQR AFVRGLVDSE K
|
| |