Gene EcSMS35_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3730 
Symbol 
ID6147144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3799604 
End bp3800449 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content53% 
IMG OID641618556 
Productglycerol-3-phosphate transporter membrane protein 
Protein accessionYP_001745696 
Protein GI170682666 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGA ACCGTCCGTG GCTGACAATA TTCAGCCATA CCATGCTGAT CCTCGGGATC 
GCGGTGATCC TCTTCCCGCT GTACGTGGCG TTTGTCGCGG CGACACTGGA TAAACAAGAA
GTCTATGCCG CGCCGATGAC GCTAATCCCC GGCACACATC TGCTGGAAAA CATCCACAAC
ATCTGGGTAA ACGGGGTAGG CACGAATAGT GCGCCGTTCT GGCGGATGTT GCTTAACAGC
TTCGTGATGG CGTTCAGCAT TACGCTCGGC AAAATTACCG TCTCGATGCT CTCGGCATTT
GCCATTGTCT GGTTTCGTTT TCCGCTACGT AACCTCTTCT TCTGGATGAT TTTTATCACC
CTGATGCTGC CGGTTGAAGT GCGTATCTTC CCGACGGTGG AAGTCATCGC TAACCTGAAA
ATGCTCGACA GCTACGCAGG TTTAACGCTG CCGCTGATGG CCTCGGCGAC CGCGACCTTC
CTGTTCCGCC AGTTCTTTAT GACGCTGCCG GATGAGCTGG TGGAAGCGGC GCGGATCGAC
GGTGCGTCAC CAATGCGTTT CTTTTGCGAC ATCGTTTTTC CGCTGTCCAA AACTAATCTG
GCGGCGCTGT TTGTGATCAC CTTTATTTAC GGCTGGAACC AGTATTTGTG GCCGTTGTTG
ATTATTACCG ATGTGGATCT CGGCACCACC GTAGCAGGGA TTAAAGGGAT GATCGCCACA
GGCGAAGGCA CCACGGAATG GAACTCGGTG ATGGCGGCGA TGTTGTTAAC CCTGATCCCA
CCAGTAGTGA TTGTTTTAGT GATGCAGCGT GCCTTCGTGC GCGGCCTGGT CGATAGTGAG
AAATAA
 
Protein sequence
MIENRPWLTI FSHTMLILGI AVILFPLYVA FVAATLDKQE VYAAPMTLIP GTHLLENIHN 
IWVNGVGTNS APFWRMLLNS FVMAFSITLG KITVSMLSAF AIVWFRFPLR NLFFWMIFIT
LMLPVEVRIF PTVEVIANLK MLDSYAGLTL PLMASATATF LFRQFFMTLP DELVEAARID
GASPMRFFCD IVFPLSKTNL AALFVITFIY GWNQYLWPLL IITDVDLGTT VAGIKGMIAT
GEGTTEWNSV MAAMLLTLIP PVVIVLVMQR AFVRGLVDSE K