Gene EcSMS35_3722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3722 
Symbol 
ID6145509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3792762 
End bp3793457 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID641618549 
Productpirin family protein 
Protein accessionYP_001745689 
Protein GI170680488 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTACT TACGCAAAGC AAATGAACGT GGTCATGCAA ATCATGGCTG GCTGGATTCC 
TGGCATACTT TCTCTTTTGC CAACTATTAC GATCCGAACT TTATGGGCTT CTCCGCGCTG
CGCGTGATTA ACGACGACGT GATTGAAGCA GGGCAGGGCT TTGGCACTCA CCCGCATAAA
GATATGGAAA TTTTGACCTA CGTGCTGGAA GGTACTGTTG AGCACCAGGA CAGCATGGGC
AATAAAGAGC AGGTTCCGGC GGGTGAGTTC CAGATTATGA GTGCGGGTAC GGGTATCCGT
CACTCTGAGT ACAACCCAAG CAGCACCGAG CGTCTGCATC TGTATCAGAT CTGGATCATG
CCTGAAGAAA ACGGCATTAC GCCGCGTTAT GAACAGCGTC GCTTCGATGC CGTACAGGGC
AAACAGCTGG TGCTCTCGCC GGATGCGCGA GATGGTTCGC TGAAAGTGCA TCAGGATATG
GAACTGTATC GTTGGGCATT GCTGAAAGAT GAGCAGTCGG TGCATCAGAT TGCCGCTGAA
CGCCGCGTCT GGATCCAGGT GGTGAAAGGC AATGTCACCA TTAACGGCGT GAAAGCCTCG
ACCAGCGATG GTCTGGCAAT CTGGGATGAG CAGGCAATCT CCATTCATGC GGATAGCGAC
AGCGAAGTGT TACTGTTCGA TCTGCCGCCG GTTTAA
 
Protein sequence
MIYLRKANER GHANHGWLDS WHTFSFANYY DPNFMGFSAL RVINDDVIEA GQGFGTHPHK 
DMEILTYVLE GTVEHQDSMG NKEQVPAGEF QIMSAGTGIR HSEYNPSSTE RLHLYQIWIM
PEENGITPRY EQRRFDAVQG KQLVLSPDAR DGSLKVHQDM ELYRWALLKD EQSVHQIAAE
RRVWIQVVKG NVTINGVKAS TSDGLAIWDE QAISIHADSD SEVLLFDLPP V