Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3718 |
Symbol | |
ID | 6142785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3787297 |
End bp | 3789393 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641618544 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001745684 |
Protein GI | 170684175 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAGC ACGGAGCTGA ATTGCTTTTA CAGCGGATGT TAGGAAATAC CACCGCTACT TTCAGGGAAG GGCAATGGGA AGCCATAGAT GCAGTGGTTA ATCAGCGGCG AAAACTGCTG GTTGTACAGC GCACCGGCTG GGGGAAAAGT GCCGTGTACT TCATCGCCAG TAAAATCTTC CGCGATCGCG GCGCTGGCAC GACAATTATC ATCTCTCCTT TGCTTGCCCT GATGCGTAAC CAGGTTGCCG CCGCTGAACG GTTAGGTATT ACGGCTGAAA CGTTGAATTC TACAAACAGG GAAGAATGGC AGCGCATTAG CGATAAGTTG CTGCAAGGTG AGGTCGATTG CTTGCTGGTT TCCCCGGAAC GTTTGGCAAA CCAGGACTTT ATCGAAACGG TTTTATATCC TATAGCCGAT CGTATTGGCT TGCTTGTGGT CGACGAGGCG CACTGCATCT CTGATTGGGG CCACGATTTT CGCCCGGATT ACCGACGTAT ATTAGATATT TTGCGCCAAC TGCCTGCGAA TACCCCTGTT CTGGGTACAA CCGCGACAGC GAATAACCGT GTTGTTGAGG ATATCCGTCA GCAATTGGGT GACATTGTGA TTCAGCGTGG AACGCTGGCT CGCGAAAGTT TGGCGCTTGA TGCCTTAGTC TTAGGAGAAC AGTCATCCCG TCTGGCATGG TTAGCAACGG TTATCCCTCA GTTTTCCAAA TCGGGAATTG TTTATACCCT GACGACTCGC GATGCTGAAC TTGTCGCCGA GTGGTTAAGG AAAAATGGTA TCAGTGCATT TGCTTACTAC AGCGGCGTGA CTTGTGAAGG CGCGGAAGAT TCTAATACTG CCAGGGAATA TCTGGAGCAG GCACTGCTGG CAAATAAAAT CAAAGTGCTG GTCGCGACGA CGGCATTAGG TATGGGGTTT GATAAACCTG ATTTAGGTTT CGTCATTCAT TATCAGATGC CGGGGTCTAT TGTCGGTTAC TACCAACAGG TGGGGCGTGC CGGGCGTGCT ATAGATTCCG CAGTTGGCAT ATTGCTTTGT GGTGGTGAAG ACCGCGCTAT TCATCAATTC TTCCGTGAAA GCGCCTTTCC TGCGGAGGCG CAAATTCATG AAATACTCAA CGTACTTAGC GAGAATGACG GTCTTACCCT ACGAGGCATT GAACAACGGA CGAATCTTCG TTATGGGCAA ATAGAAAAAG CACTGAAATT ATTGGTAGCG GAAAATCCAT CGCCTGTGGT GTATACCGAG AAATTATGGC GCAGAACTAT CGTCAGTTTT TCTCCTGATC ATGAACGAAT TAACCATTTG ATGAATCAGA GAAAAAGTGA ACTGGCAGAC GTTGAAAGCT ATATCACGAC CAAGGAGTGC AAAATGCAAT TTCTGCGCCG TGCACTCGAT GAGCCAAGTG CCGAACGTTG TGGTAAATGT AGCAGTTGTC TTCAGCATCC GTTATTGTCG CCCGACATTG ATAGCGGCTT ACTCCATGCG GCAAATTTAT TTATTAAACA CGCTGACCTG CCGTTAAATC TCAATAAACA GATGGCAGCT GGGGCTTTTA CTCAATACGG ATTTAAAGGG AACTTGCCTG CGGGTTTACA AGGATCTACG GGGCGAATCC TTTCTCGTTG GGGAGATTCC GGGTGGGGAA AGCAGGTAGC ACAGGAGAAA AAAACGGGGC GCTTAAGTGA TGAGCTGGTA GAAGCATGTG CGGAAATGGT TTGCCAACGC TGGAATCCGC ATCCTGAACC AACCTGGGTA TGCTGCGTTC CTTCATTAAG GCACCTCGAC CTGGTTCCTG ATTTTGCCCG GCGACTGGCG GCGAAACTTG GCTTACCTTT TATTGATGCC ATTGAAAAAG TCGTGGACAA TCCACCGCAG AAAATGCAGC AAAACCGTTT TCACCAGTGT CAAAATCTCG ACGGGGCGTT TGTGATTATC CCTCCTTTGA TGCCAGGTCC GGCGTTGCTG GTTGACGATA TCGTGGATTC TGCATGGACG CTGACAGTTC TGACAGCACT GTTACGCCAG GCAGGTTGCC CGACGGTTTA TCCTCTTGCC CTTGCGTCTA CCTCGGTAAA AAATTGA
|
Protein sequence | MEKHGAELLL QRMLGNTTAT FREGQWEAID AVVNQRRKLL VVQRTGWGKS AVYFIASKIF RDRGAGTTII ISPLLALMRN QVAAAERLGI TAETLNSTNR EEWQRISDKL LQGEVDCLLV SPERLANQDF IETVLYPIAD RIGLLVVDEA HCISDWGHDF RPDYRRILDI LRQLPANTPV LGTTATANNR VVEDIRQQLG DIVIQRGTLA RESLALDALV LGEQSSRLAW LATVIPQFSK SGIVYTLTTR DAELVAEWLR KNGISAFAYY SGVTCEGAED SNTAREYLEQ ALLANKIKVL VATTALGMGF DKPDLGFVIH YQMPGSIVGY YQQVGRAGRA IDSAVGILLC GGEDRAIHQF FRESAFPAEA QIHEILNVLS ENDGLTLRGI EQRTNLRYGQ IEKALKLLVA ENPSPVVYTE KLWRRTIVSF SPDHERINHL MNQRKSELAD VESYITTKEC KMQFLRRALD EPSAERCGKC SSCLQHPLLS PDIDSGLLHA ANLFIKHADL PLNLNKQMAA GAFTQYGFKG NLPAGLQGST GRILSRWGDS GWGKQVAQEK KTGRLSDELV EACAEMVCQR WNPHPEPTWV CCVPSLRHLD LVPDFARRLA AKLGLPFIDA IEKVVDNPPQ KMQQNRFHQC QNLDGAFVII PPLMPGPALL VDDIVDSAWT LTVLTALLRQ AGCPTVYPLA LASTSVKN
|
| |