| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3702 |
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| Symbol | glpR |
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| ID | 6144447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3767379 |
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| End bp | 3768137 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618530 |
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| Product | DNA-binding transcriptional repressor GlpR |
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| Protein accession | YP_001745670 |
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| Protein GI | 170683823 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.141419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAAA CACAACGTCA CAACGGTATT ATCGAACTGG TTAAACAGCA GGGTTATGTC
AGCACCGAGG AGCTGGTAGA GCATTTCTCC GTTAGCCCGC AGACTATTCG CCGCGATCTC
AACGAGCTGG CAGAGCAAAA CCTGATCCTG CGCCATCATG GCGGTGCGGC GCTGCCTTCC
AGTTCGGTTA ATACGCCGTG GCACGATCGC AAGGCCACCC AGACCGAAGA AAAAGAGCGC
ATCGCCCGCA AAGTGGCGGA GCAAATTCCC AATGGCTCGA CGCTGTTTAT CGATATCGGC
ACCACGCCGG AAGCGGTGGC GCACGCGCTG CTTAATCACA GCAATTTACG CATTGTGACC
AACAATCTCA ACGTCGCTAA CACGCTGATG GTAAAAGAGG ATTTCCGTAT CATTCTTGCC
GGTGGCGAAT TACGCAGCCG CGATGGCGGG ATCATTGGCG AAGCAACGCT CGATTTTATC
TCCCAGTTCC GCCTTGATTT CGGCATTCTG GGGATAAGCG GCATCGATAG CGACGGCTCG
CTACTGGAGT TCGATTACCA CGAAGTTCGC ACCAAACGCG CCATCATTGA GAACTCGCGC
CACGTTATGC TGGTTGTCGA CCACTCAAAA TTTGGCCGTA ACGCGATGGT CAATATGGGC
AGTATCAGCA TGGTAGATGC CGTCTACACC GACGCCCCGC CGCCAGTAAG CGTGATGCAG
GTGCTGACGG ACCACCATAT TCAACTGGAG CTGTGCTGA
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| Protein sequence | MKQTQRHNGI IELVKQQGYV STEELVEHFS VSPQTIRRDL NELAEQNLIL RHHGGAALPS
SSVNTPWHDR KATQTEEKER IARKVAEQIP NGSTLFIDIG TTPEAVAHAL LNHSNLRIVT
NNLNVANTLM VKEDFRIILA GGELRSRDGG IIGEATLDFI SQFRLDFGIL GISGIDSDGS
LLEFDYHEVR TKRAIIENSR HVMLVVDHSK FGRNAMVNMG SISMVDAVYT DAPPPVSVMQ
VLTDHHIQLE LC
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