| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3701 |
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| Symbol | rtcB |
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| ID | 6144881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3764385 |
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| End bp | 3765611 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641618528 |
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| Product | RtcB protein |
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| Protein accession | YP_001745668 |
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| Protein GI | 170679877 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1690] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.124467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACG AATTACTGAC CACTGAAAAT GTCCCGGTAA AAATGTGGAC CAAAGGCGTA
CCGGTAGAAG ACGATGCGCG TCAGCAACTG ATAAATACGG CGAAGATGCC GTTTATTTTC
AAACATATTG CGGTAATGCC TGATGTACAT CTGGGTAAAG GTTCCACCAT TGGTAGCGTG
ATCCCAACCA AAGGAGCGAT TATTCCGGCG GCGGTGGGGG TAGATATCGG TTGTGGAATG
AACGCGCTGC GTACCGCGTT AACGGCGGCT GACCTGCCTG AAAACCTGGC GGAGCTGCGT
CAGGCGATTG AAGCTGCCGT GCCGCATGGG CGTACCACAG GCCGTTGTAA ACGTGATAAA
GGCGCATGGG AAAAACCGCC TGTTAACGTC GATGCGAAAT GGGCTGAGCT TGAAGCCGGT
TATCAGTGGT TAACGCAAAA ATATCCGCGT TTCCTTAATA CCAATAACTA TAAACACCTG
GGAACGCTGG GAACGGGTAA CCACTTTATT GAAATTTGCC TTGATGAGTC GGATCAGGTG
TGGATTATGC TGCACTCCGG TTCACGCGGA ATTGGTAATG CCATCGGGAC TTACTTTATC
GATCTGGCGC AAAAAGAGAT GCAGGAAACA CTTGAAACGT TGCCATCGCG TGACCTGGCG
TACTTTATGG AAGGTACGGA ATATTTTGAC GATTACCTGA AAGCGGTGGC CTGGGCGCAG
CTTTTTGCCA GCCTTAACCG CGATGCGATG ATGGAAAACG TGGTAACGGC GTTGCAGAGC
GTTACGCAGA AAACGGTAAG ACAGCCACAA ACGCTGGCGA TGGAAGAGAT CAACTGTCAC
CACAACTATG TGCAAAAAGA ACAGCACTTT AGCGAAGAGA TCTATGTGAC GCGTAAAGGC
GCGGTGTCTG CTCGTGCTGG TCAATATGGA ATTATTCCCG GTTCGATGGG GGCGAAAAGC
TTTATTGTCC GTGGGCTGGG AAATGAAGAG TCGTTCTGTT CGTGCAGCCA CGGTGCCGGG
CGGGTAATGA GCCGTACTAA AGCGAAAAAA CTGTTCAGTG TGGAAGACCA AATTCGTGCC
ACCGCGCATG TGGAATGCCG TAAAGATGCC GAAGTGATCG ACGAAATCCC GATGGCGTAT
AAAGATATTG ATGCGGTGAT GGCGGCACAA AGCGATCTGG TGGAAGTTAT CTATACCCTG
CGTCAGGTGG TGTGCGTAAA AGGATAA
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| Protein sequence | MNYELLTTEN VPVKMWTKGV PVEDDARQQL INTAKMPFIF KHIAVMPDVH LGKGSTIGSV
IPTKGAIIPA AVGVDIGCGM NALRTALTAA DLPENLAELR QAIEAAVPHG RTTGRCKRDK
GAWEKPPVNV DAKWAELEAG YQWLTQKYPR FLNTNNYKHL GTLGTGNHFI EICLDESDQV
WIMLHSGSRG IGNAIGTYFI DLAQKEMQET LETLPSRDLA YFMEGTEYFD DYLKAVAWAQ
LFASLNRDAM MENVVTALQS VTQKTVRQPQ TLAMEEINCH HNYVQKEQHF SEEIYVTRKG
AVSARAGQYG IIPGSMGAKS FIVRGLGNEE SFCSCSHGAG RVMSRTKAKK LFSVEDQIRA
TAHVECRKDA EVIDEIPMAY KDIDAVMAAQ SDLVEVIYTL RQVVCVKG
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