| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3700 |
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| Symbol | rtcA |
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| ID | 6147489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3763365 |
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| End bp | 3764381 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641618527 |
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| Product | RNA 3'-terminal-phosphate cyclase |
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| Protein accession | YP_001745667 |
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| Protein GI | 170680706 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG0430] RNA 3'-terminal phosphate cyclase |
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| TIGRFAM ID | [TIGR03399] RNA 3'-phosphate cyclase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0886189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGGA TGATTGCGCT GGATGGCGCA CAGGGCGAAG GCGGCGGGCA GATCCTGCGC
TCGGCGCTGA GCCTGTCGAT GATAACCGGC CTGCCATTTA CCATCACCGG CATTCGTGCC
GGGCGGGCAA AACCGGGACT GTTGCGCCAG CATCTGACCG CGGTAAAAGC GGCTGCGGAA
ATTTGTAGGG CAACGGTGGA AGGTGCGGAG CTGGGATCGC AGCGTCTGCT CTTCCGGCCC
GGCACCGTGC GCGGCGGCGA TTACCGCTTT GCTATCGGTA GCGCCGGAAG TTGTACGCTG
GTGCTGCAAA CGGTGCTGCC CGCGCTGTGG TTTGCCGATG GACCTTCGCG TGTTGAAGTG
AGCGGAGGCA CCGATAACCC GTCGGCCCCG CCTGCGGATT TTATCCGCCG GGTGCTGGAG
CCGCTGCTGG CGAAAATGGG CATTCATCAG CAAACCACAC TAATACGCCA CGGTTTTTAT
CCTGCCGGAG GCGGGGTGGT GGCAACGGAA GTCTCGCCCG TGGCATTGTT TAACACCTTG
CAACTTGGCG AGCGCGGGAA CATTGTGCAG ATGCGTGGAG AGGTGCTATT AGCTGGCGTG
CCGAGGCATG TTGCTGAGCG TGAAATCGCT ACGCTGGTGG GGAGTTTTTC CCTGCATGAG
CAGAATATTC ATAACCTGCC GCGTGACCAG GGGCCGGGTA ATACCGTCTC GCTTGAAGTC
GAAAGTGAAA ATATCACCGA ACGCTTTTTT GTCGTCGGTG AAAAGCGCGT CAGCGCTGAG
GTGGTCGCGG CACAGTTGGT GAAAGAGGTG AAACGCTACC TGGCAAGCCC GGCGGCGGTG
GGGGAATATC TCGCCGACCA ACTGGTGCTA CCGATGGCGC TGGCGGGCGC GGGAGAATTT
ACGGTCGCCC ATCCCTCATG CCATCTGCTG ACCAATATTG CGGTGGTGGA GCGTTTCTTG
CCAGTGCGGT TTGGTCTGGT GGAGGCTGAT GGCGTAACGC GGGTGAGCAT TGAATGA
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| Protein sequence | MKRMIALDGA QGEGGGQILR SALSLSMITG LPFTITGIRA GRAKPGLLRQ HLTAVKAAAE
ICRATVEGAE LGSQRLLFRP GTVRGGDYRF AIGSAGSCTL VLQTVLPALW FADGPSRVEV
SGGTDNPSAP PADFIRRVLE PLLAKMGIHQ QTTLIRHGFY PAGGGVVATE VSPVALFNTL
QLGERGNIVQ MRGEVLLAGV PRHVAEREIA TLVGSFSLHE QNIHNLPRDQ GPGNTVSLEV
ESENITERFF VVGEKRVSAE VVAAQLVKEV KRYLASPAAV GEYLADQLVL PMALAGAGEF
TVAHPSCHLL TNIAVVERFL PVRFGLVEAD GVTRVSIE
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