Gene EcSMS35_3687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3687 
SymbolgreB 
ID6143738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3744417 
End bp3744893 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content50% 
IMG OID641618514 
Producttranscription elongation factor GreB 
Protein accessionYP_001745654 
Protein GI170680405 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.875681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC CCCTGGTTAC CCGGGAAGGG TATGAAAAAC TCAAACAAGA GCTTAATTAT 
CTCTGGCGTG AAGAACGCCC GGAGGTCACA AAGAAAGTGA CCTGGGCCGC AAGTTTGGGC
GACCGCAGCG AAAATGCTGA CTATCAGTAT AATAAAAAGC GCCTGCGTGA AATCGACCGT
CGCGTGCGCT ATCTCACTAA ATGCATGGAA AATCTCAAAA TCGTCGATTA CTCCCCGCAG
CAGGAAGGCA AAGTCTTTTT TGGCGCGTGG GTGGAGATTG AAAACGACGA TGGCGTGACT
CACCGTTTCC GTATTGTCGG CTACGATGAA ATTTTTGGCC GTAAAGATTA CATCTCTATC
GATTCCCCGA TGGCCCGCGC ATTGCTGAAA AAAGAAGTCG GCGATCTGGC GGTGGTGAAT
ACCCCTGCCG GGGAAGCGAG CTGGTATGTT AATGCTATCG AGTACGTGAA ACCGTAA
 
Protein sequence
MKTPLVTREG YEKLKQELNY LWREERPEVT KKVTWAASLG DRSENADYQY NKKRLREIDR 
RVRYLTKCME NLKIVDYSPQ QEGKVFFGAW VEIENDDGVT HRFRIVGYDE IFGRKDYISI
DSPMARALLK KEVGDLAVVN TPAGEASWYV NAIEYVKP