Gene EcSMS35_3686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3686 
SymbolompR 
ID6145369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3743470 
End bp3744189 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content55% 
IMG OID641618513 
Productosmolarity response regulator 
Protein accessionYP_001745653 
Protein GI170679581 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.550003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAGA ACTACAAGAT TCTGGTGGTT GATGACGACA TGCGCCTGCG CGCGCTGCTG 
GAACGTTATC TCACCGAACA AGGCTTCCAG GTTCGAAGCG TCGCTAATGC AGAACAGATG
GATCGCCTGC TGACTCGTGA ATCTTTCCAT CTTATGGTAC TGGATTTGAT GTTACCTGGT
GAAGATGGCT TGTCGATTTG CCGACGTCTT CGTAGCCAGA GCAATCCGAT GCCGATCATT
ATGGTGACGG CGAAAGGGGA AGAAGTGGAC CGTATCGTTG GCCTGGAGAT TGGCGCTGAC
GACTACATTC CAAAACCGTT TAACCCGCGT GAATTGCTGG CCCGCATTCG TGCAGTGCTG
CGTCGTCAGG CCAACGAACT GCCGGGCGCG CCGTCACAGG AAGAGGCGGT AATTGCTTTC
GGTAAGTTCA AACTTAACCT CGGTACGCGT GAAATGTTCC GCGAAGATGA GCCGATGCCG
CTCACCAGCG GTGAGTTTGC GGTACTGAAG GCACTGGTCA GCCATCCGCG TGAGCCGCTC
TCCCGCGATA AGCTGATGAA CCTTGCCCGT GGCCGTGAAT ACTCCGCAAT GGAACGCTCC
ATCGACGTGC AGATTTCGCG TCTACGCCGC ATGGTGGAAG AAGATCCGGC GCATCCGCGT
TACATTCAGA CCGTCTGGGG TCTGGGCTAC GTCTTTGTAC CGGACGGTTC TAAAGCATGA
 
Protein sequence
MQENYKILVV DDDMRLRALL ERYLTEQGFQ VRSVANAEQM DRLLTRESFH LMVLDLMLPG 
EDGLSICRRL RSQSNPMPII MVTAKGEEVD RIVGLEIGAD DYIPKPFNPR ELLARIRAVL
RRQANELPGA PSQEEAVIAF GKFKLNLGTR EMFREDEPMP LTSGEFAVLK ALVSHPREPL
SRDKLMNLAR GREYSAMERS IDVQISRLRR MVEEDPAHPR YIQTVWGLGY VFVPDGSKA